object of type 'int' has no len()

[ManuPoretti]

Hello,

After correcting the HiC matrix I run into this problem that was already mentioned by other users. I was wondering if you have found a solution.

Cheers!

WARNING:Scaffolds:

Hub-hub contact for bin_id:583 scaffold: ctg002710_np12_7 degree: 4 with bin_id: 1958 scaffold: ctg002520_np12_7 degree:4

############## these cases could introduce problems in the assembly. Thus, node is being removed from the graph. ##############

Traceback (most recent call last): File "/usr/local/bin/assemble", line 312, in main(args) File "/usr/local/bin/assemble", line 306, in main super_contigs = assembl.assemble_contigs() File "/usr/local/lib/python3.8/dist-packages/hicassembler/HiCAssembler.py", line 200, in assemble_contigs self.scaffolds_graph.join_paths_max_span_tree(conf_score, node_degree_threshold=2e3, File "/usr/local/lib/python3.8/dist-packages/hicassembler/Scaffolds.py", line 27, in wrapper f_result = func(*args, **kwds) File "/usr/local/lib/python3.8/dist-packages/hicassembler/Scaffolds.py", line 1814, in join_paths_max_span_tree self._remove_weakest(nxG) File "/usr/local/lib/python3.8/dist-packages/hicassembler/Scaffolds.py", line 2013, in _remove_weakest if len(path) < 5: TypeError: object of type 'int' has no len()