RUIXUE LIU

Hi contributors, I face similar questions that vg is not able to merge and into graph.vg after using command `vg construct -S`. I wonder if is there any progress on...

> I came back to this issue hoping that it would have been solved, as I would have liked to be able to create a conda environment with vcflib, mainly...

> > Hi, I tried your recipe on a cluster, but unfortunately, it failed. The fatal error message is: "No LD_PRELOAD in fakeroot environment." I'm wondering if you would be...

When `vg augment` running for another chromsome vg graph, it returned a more detailed stack trace: ``` ━━━━━━━━━━━━━━━━━━━━ Crash report for vg v1.48.0 "Gallipoli" Stack trace (most recent call last):...

I decided to give up augment step because the large SVs are my targets. Anyway, it's good to use `vg validate` to test if my graph and gam are correct....

Thank you for answering! Another question is when combining SNFs, [An SV candidate matches a group if it has the same SV type and the sum of start position and...

> Thank you for answering! Another question is when combining SNFs, [An SV candidate matches a group if it has the same SV type and the sum of start position...

I'm still not quite clear. Perhaps you misunderstood my question? The formula that I'm struggling to understand is:  It belongs to the section on how to cluster SV candidates...