Martin Weigert

hi, `convolve` does not support "valid" convolution out of the box, but it should be easy to define it yourself: ```python import numpy as np from gputools.convolve import convolve def...

Thanks! > Can you add `python3 setup.py bdist_wheel sdist` to your build_pypi script and update the `twine upload dist/*whl` to also upload the sdist as well? Should be done now:...

Hi, Yes, as you and others correctly observed, this is an issue with pyopencl, on which biobeam. Once `python -c "import pyopencl"` runs, everyting else should be fine. Sadly, getting...

Forgot another caveat: Some CPUs don't support some OpenCL extensions that gputools/biobeam needs. So that might be another rpoblem with the hardware you have (Intel HD 520). You can check...

Wow, thanks a lot for digging that deep! The whole qhull part is indeed a bit opaque and I remember that it was rather tedious to ensure its using the...

Ok, too bad! You mentioned that tensorflow is a pain during debugging: one could avoid calling tensorflow during the NMS/qhull section by splitting the prediction and NMS call into two...

Indeed, congrats and thanks for letting us know, well appreciated! :)

Yes, this seems to be an issue with the CuDNN library version installed, so upgrading it might help (see first error message).

Hi @lcferme , Might related to #121 . Could you try the following: 1) Close all running notebooks and restart the prediction notebook 3) print the shape of the input...

Hi @migueLib , Thanks for this message and yes, we'd be very happy to have it added to bioconda :) Maybe you could detail a bit the process that would...