zindex

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No uri support error

4

I compiled the tool under a conda ENV. When I try to test it with a toy sample: 1,2 3,4 It says "no uri support for '��������" Can you offer...

crotoc

Can I know how to use --raw?

1

I indexed a file using zindex by column 4. I want to search for the columns containing a keyword. Can you guys tell me how to use --raw to achieve...

crotoc

ghost

These changes just save space, but if the flag is passed non-indexed lines can't currently be queried. I save the lines in the access points but wanted to break it...

sbendiola

Sparse line indexing

2

Maybe we should store line lumbers in the AccessPoints so we can random access by line number without a full LineIndex (which can be big in some cases).

mattgodbolt

Hi, I want to index a vcf file based on fields "#CHROM" and "POS", representing column1 and column2 in the file, respectively. How can I modify the json file so...

kostasgalexiou

replace the vendored libs with ones discovered using `find_package`

3

KOLANICH

Ideally: * [ ] Minimum C++17 * [ ] use conan (see #40) * [ ] clang-format with a known good setting * [ ] sanitizer builds etc * [...

mattgodbolt

LineFinder only pushes the lines that match the onLine, which means the line numbers are wrong for that mode. And if you don't suply an index at all then no...

mattgodbolt

``` In file included from /usr/include/signal.h:328, from /home/matthew/dev/zindex/tests/catch.hpp:6442, from /home/matthew/dev/zindex/tests/test_main.cpp:2: /home/matthew/dev/zindex/tests/catch.hpp:6465:33: error: size of array ‘altStackMem’ is not an integral constant-expression 6465 | static char altStackMem[SIGSTKSZ]; | ^~~~~~~~ /home/matthew/dev/zindex/tests/catch.hpp:6516:45: error:...

mattgodbolt