Matt Cieslak

@kellychang4 thank you for opening such a detailed issue! Did your bval files come out of dcm2niix with decimals?

ok great, glad to hear that it ultimately worked. Looking toward a fix for this issue do you think it would make sense to allow decimals in the bvals? Or...

My main worry is whether the decimals are worth it. Currently we have settings like `--b0-threshold 50` that suggest that the b-values can be incorrect by up to 50. The...

Thanks for the detailed report @araikes. I can confirm that --low-mem and --mem-gb are not respected in most of qsiprep. The fact that synthseg is still getting --threads=2 in its...

yay! The that's how I was hoping it would work. Early in the pipeline there are a lot of high-memory things happening. You assigned omp-nthreads to 8 here?

perfect. This will be in 0.19.1

that would be great to add to the anatomical derivatives. Sounds like another good contender for 0.19.1

The boilerplate gets generated in the workflow-building functions. For example, the mrtrix workflows are full of citations like [here](https://github.com/PennLINC/qsiprep/blob/18448725a89610660636a43f5da8971b0e64b593/qsiprep/workflows/recon/mrtrix.py#L114). PyAFQ could definitely use some citation boilerplate

wow, this is a great bug find. Does the BIDS validator say that your bval files are valid?

That section of the bids spec is also wrong about how fsl orients bvecs. Probably worth a fresh PR