Mathieu Boudreau, PhD

Is this being missed by a current test?

Most IVADOMED warnings related to the transforms.py file are resolved in their current master, so it should be fixed when they release their next version.

Just as a heads up for this - we'll have to be extra vigilent about the version numbers we save in pipy if we do this. If someone accidentally slips...

Would be great if the QC listed potential outliers to be cleaned up, likely from the morphometrics (eg too small myelin or axon area, non-realistic g-ratio, etc), and/or "incomplete" axons...

Generating a mask of these potential outliers might make it quicker to "clean up" the images (i.e. could remove potential outliers, and then just subtract the mask from the full...

This is an issue now for #682 because it has dual light/dark themes. I'll look into if there's documented design principles on how to best design logos for dual light/dark...

So in terms of resolving this in Github, there's appears to be a way to change the image depending on if the user is using light or dark mode. Details...

These resources have ideas on dark mode logo design: https://www.emailonacid.com/blog/article/email-development/dark-mode-logo-problems/ https://www.actionrocket.co/email-design-review/how-to-create-a-dark-mode-friendly-email-logo https://reaction.ca/blog/adapting-branding-for-dark-mode/

Hi @GrimmSnark - it seems the BIDS error is indicating that the issue is centralized somewhere in the IVADOMED package, which is a dependency that's also managed by our group...

Can we revisit this? I think there are several latest MATLAB versions now that are no longer compatible with qMRLab due to this javacomponent feature being removed