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Published 20 hours ago • verified publisher icon mathewchamberlain

Seurat v4.3.0 compatibility issue

Open potulabe opened this issue 1 year ago • 1 comments

Hi! Thanks a lot for the SignacX package! I've just encountered a problem, trying to run it with the Seurat v4.3.0, where they had changed column names of a dataframe, returned by the FindMarkers function. So instead of avg_logFC they have avg_log2FC. And because of it the cluster assignment in SignacBoot doesn't work properly.

potulabe avatar Feb 16 '23 16:02 potulabe