m3gnet
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could u provide a simple code example how to call the pretrained model to prediction formation energy?
and other properties?
The notebooks here show how to relax a strucutre. The notebooks in the megnet repo (see https://github.com/materialsvirtuallab/megnet) provide an example code of how to predict formation energies and other properties. You simply need to relax the structure with m3gnet and then use the models from MEGNet to predict the properties.
Thanks for the quick update with the hint. i tried this: from m3gnet.utils.models import load_model, AVAILABLE_MODELS gives error:
Traceback (most recent call last):
File "
I still recommend providing a jupyter notebook here with an example code of how to predict formation energies and other properties using this m3gnet models to make this package self-contained -:).
@usccolumbia
For those m3gnet property models, as described in the pretrained
folder (https://github.com/materialsvirtuallab/m3gnet/blob/main/pretrained/matbench_properties.md), you need to first download them from figshare. Then loading and using them can be done with the below three lines of code:
from m3gnet.models import M3GNet
m3gnet_e_form = M3GNet.from_dir(e_form_folder)
e_form_predict = m3gnet_e_form.predict_structure(a_structure)
The a_structure
should be a pymatgen structure. If you haven't worked with it, you can follow this example to get a pymatgen structure of LiFePO4: notebook
The e_form_folder
is the path to the folder containing parameter files of the m3gnet property model. For example, I downloaded the pretained models into ./m3gnet_models
folder, which is at same folder with my working jupyter notebook running the above three lines of codes. Then, the e_form_folder
can be m3gnet_models/matbench_mp_e_form/0/m3gnet/
.
You should be able to load and use those property models with the above.