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MOF workflow

Open tjaffrel opened this issue 9 months ago • 2 comments

Summary

Include a summary of major changes in bullet points:

  • Added zeo++ class and job to compute various properties of MOF and zeolites with various gas molecules
  • multiprocessing for zeo++ evaluation, use cif file, pymatgen structure
  • a standard check to see if a structure is likely to be porous, and especially a MOF

Additional dependencies introduced (if any)

  • it uses the zeo++ software, available here: https://www.zeoplusplus.org/

TODO (if any)

Add the full workflow for MOF optimization, filtering step, combination with MLFF (more broadly ase calculator), widom insertion Monte Carlo Simulation to compute Henry coefficients, averaged interaction energy, and heat of adsorption with MLFF. Create Documentation.

tjaffrel avatar Apr 02 '25 02:04 tjaffrel

Happy to review once this is ready.

JaGeo avatar Apr 02 '25 13:04 JaGeo

You may wish to consider using the conda-installable fork of zeo++ that has been patched by EPFL: https://github.com/lsmo-epfl/zeopp-lsmo

Andrew-S-Rosen avatar Apr 10 '25 20:04 Andrew-S-Rosen