Nico Matentzoglu

From the uPheno perspective, this is how things are separated: 1. Phenotypic characteristics (weight, height, amount) live in PATO 2. Biological traits (body weight, glucose level in blood, increased rate...

One word of caution from my end - I would not use an ontology submission to challenge the way we do phenotype modelling in dozens of OBO ontologies for more...

I personally dont agree with suggestions two (add column makes the table too wide) and three (removing the social column should be done independently of this question here). What about...

I was using this and it worked for me: ``` sh -c "$(curl -fsSL https://raw.githubusercontent.com/INCATools/ontology-development-kit/master/seed-via-docker.sh)" -C oba-odk.yaml ``` (replace oba-odk.yaml with whatever your config file is called) Also remember to...

@AsaphHall in this case unfortunately its difficult to assist as I cant replicate the error. Sorry about that! Will you try ODK runner and report if that worked for you?

Awesome, thanks @AsaphHall for following up! Much appreciated! can you tell us for which cases you need to use `sh`?

Can we close the issue?

I would check that the java and py4j versions used on the server are the same as in ODK

OLD COMMENT PERTAINING TO setuptools INSTALL ERROR I was almost done testing, when I encountered some issues with some incompatible python packages. Can you instruct me again how to update...

> In other words, the base image and the Python version are already coupled by default. I did not realise this, probably because I didnt read something carefully enough! >...