Matthias Hörtenhuber

Results 202 comments of Matthias Hörtenhuber

> For the structure of the workflow and nested workflows, see https://gitlab.liris.cnrs.fr/sharefair/bioflow-insight which can parse the DSL2 definitions and generate an RO-Crate. Looks interesting, unfortunately is a bit too slow...

Done for now. Waiting on https://github.com/ResearchObject/ro-crate-py/issues/185 to find a better way to write all files which are part of an nf-core repo

I don't see the cache being reused...

okay, so this would then only help for modules with a lot of tests?

wouldn't they have different environments?

Can you please add a few more modules? I would like to see it actually working.

for testing you can do similar things to https://github.com/nf-core/tools/blob/master/tests/modules/patch.py

Would adding `$HOME=/root` to the dockerfile solve this issue?

any conclusions here, @edmundmiller ?