scDRS
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martinjzhang
Single-cell disease relevance score (scDRS)
Hi, this is a nice tool, thanks for your effort! I ran a downstream analysis on multiple traits at once, but I found that the number of _n_fdr_0.2_ in some...
when I was trying to visualize the group level statistics, I encountered this error. Could you please help me with this? Thank you for your time! ``` TypeError: plot_group_stats() got...
Dear scDRS devs, Hi, I tried following the tutorial (https://martinjzhang.github.io/scDRS/index.html) and running the quick test after installing `scDRS` in a conda env: ``` git clone https://github.com/martinjzhang/scDRS.git cd scDRS git checkout...
Hello, when I looked at the enrichment of AD symptoms in my data alone, I found that AD was enriched in MG. But when I looked at multiple diseases at...
Hi, I would like to ask what the impact is on the results of whether the gene set **gs file** contains the weight value. I discovered while watching magma tutorials...
scDRS may not be compatible with number 1.24.4: > ERROR tests/test_CLI.py - AttributeError: module 'numpy' has no attribute 'long'
Hi! Our scRNA-seq data was processed using the Seurat package. In order to run scDRS with our scRNA-seq data, I first converted the Seurat object saved as an RDS file...
Hello, while I was customizing my putative disease genes, I thought we might need to concern about 'beta value' or 'odds ratio'. As your manuscript suggested, putative disease genes are...
Hello. Thank you for creating and maintaining this easy to use tool. When scoring cells, have you considered how single-cell splicing data, stored as a cell-by-intron matrix of percent-spliced/PSI values,...
