internal error: entered unreachable code: expected '+' or '-', but got <

[upsm-123]

1. When I was run ordered_pangenome_growth_statistics.md :(RUST_LOG=info panacus ordered-histgrowth -c bp -l 1,2,3,42 -S -e hprc-v1.0-mc-grch38.exclude.grch38.txt -O hprc-v1.0-mc-grch38.order.samples.txt hprc-v1.0- mc-grch38.gfa > hprc-v1.0-mc-grch38.ordered-histgrowth.bp.tsv),happends error is followde: [2025-03-10T09:03:07Z ERROR panacus::graph_broker::abacus] order list does not contain information about path CH M13#0#chr22 [2025-03-10T09:03:07Z INFO panacus::graph_broker] calculating abaci for count_types: [Bp], and edge: false [2025-03-10T09:03:07Z INFO panacus::io] loading graph from hprc-v1.0-mc-grch38.gfa [2025-03-10T09:03:07Z INFO panacus::graph_broker::util] parsing path + walk sequences thread 'main' panicked at src/graph_broker/graph.rs:45:18: internal error: entered unreachable code: expected '+' or '-', but got > note: run with RUST_BACKTRACE=1 environment variable to display a backtrace

2. I'd like to ask how to create a growth curve for an edge. Can you provide me with the specific steps? Can the command be executed in this way? RUST_LOG=info panacus histgrowth -l 1,2,3,15 -c edge -S -a -s 15_duck.paths.haplotypes.txt 15_duck.gfa > 15_duck.edge.tsv If so, I got the following error message. [2025-03-11T02:28:11Z INFO panacus::graph_broker::util] parsing path + walk sequences thread 'main' panicked at src/graph_broker/graph.rs:45:18: internal error: entered unreachable code: expected '+' or '-', but got < note: run with RUST_BACKTRACE=1 environment variable to display a backtrace

[heringerp]

Which version of panacus are you using?

[upsm-123]

Which version of panacus are you using? Version 0.3.3

[upsm-123]

I used mambd to installed

[heringerp]

Unfortunately, version 0.3.3 is not yet available using mamba. Mamba/bioconda is still on version 0.3.0. You could either install the binary release or install from source. The issue should be fixed there.

I might be able to get the current version to bioconda at the end of the week.

[upsm-123]

OK，thank you！

[upsm-123]

It has been solved. Thank you again.