OCT-Converter

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Acquisition Date for .e2e files

3

Hi everyone, First of all, thanks @marksgraham for taking the time to build this amazing OCT-converter. My question is related to the acquisition date for .e2e OCTs. Neither your OCT-converter...

rubeenmp

Code for reading Zeiss' obfuscated dicom format is available here: https://github.com/pydicom/pydicom/discussions/1618 I can implement but don't have any zeiss dicom data to test on - if anyone has any to...

marksgraham

(E2E-Export) .avi not exported properly + images darker

13

Hi There! First of all, thank you Mark for your work! I was trying out your implementation for converting Heidelberg's E2E format to images and videos, respectively. I can execute...

cklat

Issue when converting single image Dicom

7

Hi, Thank you for the great tool! We are using it to convert all the formats however we are noticing that when a dicom file contains only a single image,...

yehudahkay

Error while opening E2E files

9

Hey, your converter is a long needed tool. Somehow I have problems to open E2E files using your example E2E code. Everytime, I got this error message: Traceback (most recent...

JosefKauer

Pixel distribution in fda files

4

Hi Mark Hope you're doing well. These days I've been extracting some fda files to png and I've notice that the program extracts all the images with the same distribution...

antoniohupa

Get layer positions from bscan metadata

8

Hi Mark, You added `bscan_metadata` to the e2e reader in the latest commits. I think each slice of layer segment has one corresponding `bscan_metadata`. I was wondering how can I...

jh88

Hi, is there any way to find scaleX in metadata

8

I found scaley in metadata, but i didn't find out scaleX in this. is there any way I can find scaleX？

big97kai

Roadmap and development ideas

14

Documenting the roadmap here, feel free to pick up any issues or suggest more: ### Easy first issues - [x] Add type hints throughout. [This reader](https://github.com/marksgraham/OCT-Converter/blob/main/oct_converter/readers/boct.py) has an example. Types...

marksgraham

Feedback on Dicom files

23

Hi Mark， About outputting dicom file label information. 1、I can obtain all the fundus data now, but can the number of files output in dicom format be consistent with images?...

Jackiecs3