marchoeppner

Thanks for the feedback. I actually went back to the archived run data, re-extraced it (on a different system) and there everything worked. I assume now that something about that...

To add, I ran Spades standalone (3.15), with no resource limits as well as 6cpus/25Gb ram - and the scaffolds.fasta was identical between the runs. So it does seem to...

After some md5sum'ing, the divergence occurs during the cleaning up of the contig names. Something about the hash sorting randomly returning sequences of equal length, I suppose. Just looking at...