Marcela Uliano-Silva

Hi Christiophe, This seems to me more a slurm setting up problem than a mitohifi problem. Have you run your installation with the test dataset outside slurm to see if...

Hi christophe, Are you running inside a singularity or with your own installation? Did you run with the test dataset? Em qui., 13 de out. de 2022 às 08:07, ChristophePatterson...

Hi @bishopia have you tested mapping with a different reference? I'm suspicious that this is not a singularity error, rather its possible you are just not finding any mappings. Let...

@bishopia Bear with us please, we are all busy this week. But @ksenia-krasheninnikova will be able to help you soon!

Hi all, I just ran an implementation test today with the code that is there at it passed fine. But let me have a look at it tomorrow! Best, M...

Hi pdoris, I just pulled the docker again and ran it, and it all worked fine for me. Not sure what is going on? Which singularity version you are using?

Two things I see: your -o should be 5 (see --help message), and you are giving 128 threads to your run? -t 1 for the test should be enough

Hi yang, Can I have the exact command you ran? Thank you

Hi bm-silva, Thanks for the info. We'll look into it and let you know soon.

Can you give us details of your run please: using docker, local installation, command ran etc... Em ter., 5 de dez. de 2023 às 11:18, Yali1989 ***@***.***> escreveu: > Hi，...