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Computing resource utilization is very low

Open sh0rt2l0ng opened this issue 5 months ago • 3 comments

Hello Verkko team, we are recently trying to test the nanopore-only T2T workflow with verkko on a r5.16xlarge instance. But from our observation, verkko persistently has a low utilization of the available computing resources for each task with snakemake. May we know if there is a recommended way to boost the performance via any parameters or configuration? Any guideline for this would be appreciated. Thanks! image

sh0rt2l0ng avatar Sep 13 '24 22:09 sh0rt2l0ng