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Better error reporting

Open Dmitry-Antipov opened this issue 1 year ago • 1 comments

Crashes are hard to find in current verkko log, also at some moment it would be nice to have more feedback like unoptimal parameters detected, or something went not how we expected but still was able to finish. Definitely not top priority, just to keep in mind when thinking about refactoring

Dmitry-Antipov avatar Feb 01 '24 00:02 Dmitry-Antipov

Added a simple post-processing script which will find the failed step and tail all the err files there, should hopefully at least capture the actual error though still noisy.

skoren avatar Aug 15 '24 22:08 skoren

Can add onerror in snakemake files for better time/memory limit

Dmitry-Antipov avatar Oct 09 '24 19:10 Dmitry-Antipov