merqury
merqury copied to clipboard
marbl
k-mer based assembly evaluation
Hi, I assemble a genome using Hifi reads. However, I am confused that NGS reads and Hifi reads which might be better for qualifying our genome. I thinks NGS reads...
Phase
Dear author I would like to consult where the color is inconsistent in the picture, (the changing contig),What is the generating file that lets me know which contig it is?...
Hi there, Very nice tool you have here!! I'm working with a polyploid (4X) and was wondering if there is an easy way to change the x axis in the...
Hi, How to limit threads when running merqury (merqury.sh)? I used default parameter and it seemed to take up too many cores. I'll really appreciate your suggestions. Thanks.
Hello, I'm very excited to test and assess the quality of our phased assembly (FALCON-Unzip -> FALCON-Phase). However due to the nature of our system we are unable to acquire...
Hey, Great tool, it's very useful and easy to use! I ran Merqury on an Illumina-based assembly I had and obtained a completeness estimate much larger than I expected, given...
Hello, Why do the total values in `completeness.stats` and `qv` files differ so much? What do they represent and how they relate to each other? I run `merquryfk` with a...
Hi @arangrhie, Are you considering to release a new version of Merqury? I saw that you committed Merqury to solve some issues and to use Meryl 1.4, however the last...
Hi Thank you for developing this amazing tool! I have trio-binning data of a hybrid fish: Illumina data from mother and father and Hi-Fi data from the hybrid. I am...
Hello, I'm having some issues getting any output from Merqury. I'm working with Illumina data. I built the meryl database with the following code (in a nextflow workflow) meryl k=21...
