MetaCompass
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Error in job reference_selection
Hi,
I'm using MetaCompass v2.0-beta. Example1 worked but example2 didn't. It ended up with
Error in job reference_selection while creating output files example2_output/reference_selection/mc.refseq.fna, example2_output/reference_selection/mc.refseq.ids. MissingOutputException in line 64 of /home/mpg02/MMTM/yiming.shi/metacompass/snakemake/metacompass.py: Missing files after 5 seconds: example2_output/reference_selection/mc.refseq.ids This might be due to filesystem latency. If that is the case, consider to increase the wait time with --latency-wait. Exiting because a job execution failed. Look above for error message [Thu Sep 30 18:14:47 2021] Will exit after finishing currently running jobs. [Thu Sep 30 18:14:47 2021] Exiting because a job execution failed. Look above for error message
Any idea how to fix the problem? Thanks in advance.
Got the same error here.
Does someone know how to fix this?
Thank you!
@AKBode try to check your mash version! I have updated mash to v.2.1 and it worked! :)