Krona
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No such file or directory at /usr/local/bin/ktImportText line 71.
Hi, I'm using Cygwin64 terminal on windows 10.
I have sucessfully installed krona with by using the scripts below.
$curl -LOk https://github.com/marbl/Krona/releases/download/v2.7/KronaTools-2.7.tar
$tar xvf KronaTools-2.7.tar
$cd KronaTools-2.7
$ ./install.pl
Creating links...
Installation complete.
Run ./updateTaxonomy.sh to use scripts that rely on NCBI taxonomy:
ktClassifyBLAST
ktGetLCA
ktGetTaxInfo
ktImportBLAST
ktImportTaxonomy
ktImportMETAREP-BLAST
Run ./updateAccessions.sh to use scripts that get taxonomy IDs from accessions:
ktClassifyBLAST
ktGetTaxIDFromAcc
ktImportBLAST`
```
However, when i try to convert my text file to krona it said no such filw or directory.
```
`user@here ~/KronaTools-2.7
$ ktImportText C:/Users/Desktop/kronaformatfile -o t C:/Users/Desktop/output
No such file or directory at /usr/local/bin/ktImportText line 71.`
```
May i know is there a way around this ? Thank you.
Regards,
Goh.