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Coordinate conversion in UCSC browser

Open gevro opened this issue 3 years ago • 1 comments

Hi, It would be super useful to activate both the View->In other genome, and the Liftover tools in the v1.0 and v1.1 UCSC browsers, both between them and to hg19/h38.

Many users will need very quick conversions of coordinates, without having to run the liftover command line tools with chain files.

Thanks.

gevro avatar Dec 25 '21 15:12 gevro

The UCSC browser don't currently support liftover and coordinate conversion between assembly hubs and other hubs or the database based genomes.

I will put in an enhancement request.

gevro @.***> writes:

Hi, It would be super useful to activate both the View->In other genome, and the Liftover tools in the v1.0 and v1.1 UCSC browsers, both between them and to hg19/h38.

Many users will need very quick conversions of coordinates, without having to run the liftover command line tools with chain files.

Thanks.

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diekhans avatar Dec 25 '21 19:12 diekhans