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Published
20 hours ago •
mamba-org
mamba-org
r-base 3.4.3** is uninstallable because it conflicts with any installable versions previously reported.
Troubleshooting docs
- [X] My problem is not solved in the Troubleshooting docs
How did you install Mamba?
Other (please describe)
Search tried in issue tracker
uninstallable, previously reported, installable
Latest version of Mamba
- [X] My problem is not solved with the latest version
Tried in Conda?
I have this problem with Conda as well, without using Mamba
Describe your issue
I can no longer install r-base 3.4.3 with mamba (nor conda) on Linux. It did still work last December and it still does for macOS with the most recent version of mamba. The exact command failing:
mamba create -c nodefaults -n test_rbase r-base=3.4.3
I do not understand what the "is uninstallable because it conflicts with any installable versions previously reported" error means since I only try installing one package, not multiple. Can you please enlighten me what is happening here?
mamba info / micromamba info
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mamba (1.4.2) supported by @QuantStack
GitHub: https://github.com/mamba-org/mamba
Twitter: https://twitter.com/QuantStack
█████████████████████████████████████████████████████████████
active environment : None
shell level : 0
user config file : /home/worku005/.condarc
populated config files : /home/worku005/.condarc
conda version : 22.11.1
conda-build version : not installed
python version : 3.9.13.final.0
virtual packages : __archspec=1=x86_64
__glibc=2.31=0
__linux=4.15.0=0
__unix=0=0
base environment : /lustre/BIF/nobackup/worku005/bin/miniconda3 (writable)
conda av data dir : /lustre/BIF/nobackup/worku005/bin/miniconda3/etc/conda
conda av metadata url : None
channel URLs : https://conda.anaconda.org/conda-forge/linux-64
https://conda.anaconda.org/conda-forge/noarch
https://conda.anaconda.org/bioconda/linux-64
https://conda.anaconda.org/bioconda/noarch
https://repo.anaconda.com/pkgs/main/linux-64
https://repo.anaconda.com/pkgs/main/noarch
https://repo.anaconda.com/pkgs/r/linux-64
https://repo.anaconda.com/pkgs/r/noarch
package cache : /lustre/BIF/nobackup/worku005/bin/miniconda3/pkgs
/home/worku005/.conda/pkgs
envs directories : /lustre/BIF/nobackup/worku005/bin/miniconda3/envs
/home/worku005/.conda/envs
platform : linux-64
user-agent : conda/22.11.1 requests/2.28.1 CPython/3.9.13 Linux/4.15.0-72-generic ubuntu/20.04.6 glibc/2.31
UID:GID : 17259352:16777729
netrc file : None
offline mode : False
Logs
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/ \/ \/ \/ \
███████████████/ /██/ /██/ /██/ /████████████████████████
/ / \ / \ / \ / \ \____
/ / \_/ \_/ \_/ \ o \__,
/ _/ \_____/ `
|/
███╗ ███╗ █████╗ ███╗ ███╗██████╗ █████╗
████╗ ████║██╔══██╗████╗ ████║██╔══██╗██╔══██╗
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██║╚██╔╝██║██╔══██║██║╚██╔╝██║██╔══██╗██╔══██║
██║ ╚═╝ ██║██║ ██║██║ ╚═╝ ██║██████╔╝██║ ██║
╚═╝ ╚═╝╚═╝ ╚═╝╚═╝ ╚═╝╚═════╝ ╚═╝ ╚═╝
mamba (1.4.2) supported by @QuantStack
GitHub: https://github.com/mamba-org/mamba
Twitter: https://twitter.com/QuantStack
█████████████████████████████████████████████████████████████
Looking for: ['r-base=3.4.3']
info libmamba Reading cache files '/tmp/tmps2w5qt6r.*' for repo index 'installed'
info libmamba Searching index cache file for repo 'https://conda.anaconda.org/nodefaults/linux-64/repodata.json'
info libmamba No valid cache found
info libmamba Expired cache (or invalid mod/etag headers) found at '/lustre/BIF/nobackup/worku005/bin/miniconda3/pkgs'
info libmamba Searching index cache file for repo 'https://conda.anaconda.org/nodefaults/noarch/repodata.json'
info libmamba No valid cache found
info libmamba Expired cache (or invalid mod/etag headers) found at '/lustre/BIF/nobackup/worku005/bin/miniconda3/pkgs'
info libmamba Searching index cache file for repo 'https://conda.anaconda.org/conda-forge/linux-64/repodata.json'
conda-forge/linux-64 Using cache
info libmamba Searching index cache file for repo 'https://conda.anaconda.org/conda-forge/noarch/repodata.json'
conda-forge/noarch Using cache
info libmamba Searching index cache file for repo 'https://conda.anaconda.org/bioconda/linux-64/repodata.json'
bioconda/linux-64 Using cache
info libmamba Searching index cache file for repo 'https://conda.anaconda.org/bioconda/noarch/repodata.json'
bioconda/noarch Using cache
info libmamba Searching index cache file for repo 'https://repo.anaconda.com/pkgs/main/linux-64/repodata.json'
info libmamba No valid cache found
info libmamba Expired cache (or invalid mod/etag headers) found at '/lustre/BIF/nobackup/worku005/bin/miniconda3/pkgs'
info libmamba Searching index cache file for repo 'https://repo.anaconda.com/pkgs/main/noarch/repodata.json'
info libmamba No valid cache found
info libmamba Expired cache (or invalid mod/etag headers) found at '/lustre/BIF/nobackup/worku005/bin/miniconda3/pkgs'
info libmamba Searching index cache file for repo 'https://repo.anaconda.com/pkgs/r/linux-64/repodata.json'
info libmamba No valid cache found
info libmamba Expired cache (or invalid mod/etag headers) found at '/lustre/BIF/nobackup/worku005/bin/miniconda3/pkgs'
info libmamba Searching index cache file for repo 'https://repo.anaconda.com/pkgs/r/noarch/repodata.json'
info libmamba No valid cache found
info libmamba Expired cache (or invalid mod/etag headers) found at '/lustre/BIF/nobackup/worku005/bin/miniconda3/pkgs'
info libmamba Starting to download targets
[+] 0.0s
info libmamba Transfer done for 'pkgs/main/noarch'
info libmamba Transfer finalized, status: 304 [https://repo.anaconda.com/pkgs/main/noarch/repodata.json] 0 bytes
info libmamba Cache is still valid
info libmamba Transfer done for 'pkgs/r/linux-64'
info libmamba Transfer finalized, status: 304 [https://repo.anaconda.com/pkgs/r/linux-64/repodata.json] 0 bytes
info libmamba Cache is still valid
info libmamba Transfer done for 'pkgs/r/noarch'
info libmamba Transfer finalized, status: 304 [https://repo.anaconda.com/pkgs/r/noarch/repodata.json] 0 bytes
pkgs/main/noarch No change
pkgs/r/linux-64 No change
pkgs/r/noarch No change
[+] 0.1s
nodefaults/linux-64 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━╸━━━━━━━━━━━━━━━╸━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 0.0 B / ??.?MB @ ??.?MB/s 0.1s
nodefaults/noarch ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━╸━━━━━━━━━━━━━━━╸━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 0.0 B / ??.?MB @ ??.?MB/s 0.1s
pkgs/main/linux-64 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━╸━━━━━━━━━━━━━━━╸━━━━━ 0.0 B / ??.?MB @ ??.?MB/s 0.1sinfo libmamba Transfer done for 'pkgs/main/linux-64'
info libmamba Transfer finalized, status: 304 [https://repo.anaconda.com/pkgs/main/linux-64/repodata.json] 0 bytes
info libmamba Cache is still valid
pkgs/main/linux-64 No change
[+] 0.2s
nodefaults/linux-64 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 0.0 B / ??.?MB @ ??.?MB/s Downloaded 0.2s
nodefaults/noarch ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━╸━━━━━━━━━━━━━━━╸━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 0.0 B / ??.?MB @ ??.?MB/s 0.2sinfo libmamba Transfer done for 'nodefaults/noarch'
nodefaults/linux-64 No change
nodefaults/noarch No change
Channel: nodefaults[linux-64,noarch], platform: linux-64, prio: 5 : 0
Cache path: /lustre/BIF/nobackup/worku005/bin/miniconda3/pkgs/cache/d4808d92.solv
info libmamba Reading cache files '/lustre/BIF/nobackup/worku005/bin/miniconda3/pkgs/cache/d4808d92.solv.*' for repo index 'https://conda.anaconda.org/nodefaults/linux-64'
info libmamba Attempt load from solv "/lustre/BIF/nobackup/worku005/bin/miniconda3/pkgs/cache/d4808d92.solv"
info libmamba Metadata solv file: https://conda.anaconda.org/nodefaults/linux-64/repodata.json 1 Wed, 24 Aug 2016 16:31:12 GMT 1.1_0.7.23
info libmamba Metadata from SOLV are valid
Channel: nodefaults[linux-64,noarch], platform: noarch, prio: 5 : 0
Cache path: /lustre/BIF/nobackup/worku005/bin/miniconda3/pkgs/cache/223a346e.solv
info libmamba Reading cache files '/lustre/BIF/nobackup/worku005/bin/miniconda3/pkgs/cache/223a346e.solv.*' for repo index 'https://conda.anaconda.org/nodefaults/noarch'
info libmamba Attempt load from solv "/lustre/BIF/nobackup/worku005/bin/miniconda3/pkgs/cache/223a346e.solv"
info libmamba Metadata solv file: https://conda.anaconda.org/nodefaults/noarch/repodata.json 1 Wed, 24 Aug 2016 16:31:12 GMT 1.1_0.7.23
info libmamba Metadata from SOLV are valid
Channel: conda-forge[linux-64,noarch], platform: linux-64, prio: 4 : 0
Cache path: /lustre/BIF/nobackup/worku005/bin/miniconda3/pkgs/cache/497deca9.solv
info libmamba Reading cache files '/lustre/BIF/nobackup/worku005/bin/miniconda3/pkgs/cache/497deca9.solv.*' for repo index 'https://conda.anaconda.org/conda-forge/linux-64'
info libmamba Attempt load from solv "/lustre/BIF/nobackup/worku005/bin/miniconda3/pkgs/cache/497deca9.solv"
info libmamba Metadata solv file: https://conda.anaconda.org/conda-forge/linux-64/repodata.json 1 W/"ea56494c310c2c1b1c4536d934399000" Mon, 08 May 2023 13:25:57 GMT 1.1_0.7.23
info libmamba Metadata from SOLV are valid
Channel: conda-forge[linux-64,noarch], platform: noarch, prio: 4 : 0
Cache path: /lustre/BIF/nobackup/worku005/bin/miniconda3/pkgs/cache/09cdf8bf.solv
info libmamba Reading cache files '/lustre/BIF/nobackup/worku005/bin/miniconda3/pkgs/cache/09cdf8bf.solv.*' for repo index 'https://conda.anaconda.org/conda-forge/noarch'
info libmamba Attempt load from solv "/lustre/BIF/nobackup/worku005/bin/miniconda3/pkgs/cache/09cdf8bf.solv"
info libmamba Metadata solv file: https://conda.anaconda.org/conda-forge/noarch/repodata.json 1 W/"e3aeca501d23ceb3917e85068851b92e" Mon, 08 May 2023 13:04:26 GMT 1.1_0.7.23
info libmamba Metadata from SOLV are valid
Channel: bioconda[linux-64,noarch], platform: linux-64, prio: 3 : 0
Cache path: /lustre/BIF/nobackup/worku005/bin/miniconda3/pkgs/cache/ffeee55f.solv
info libmamba Reading cache files '/lustre/BIF/nobackup/worku005/bin/miniconda3/pkgs/cache/ffeee55f.solv.*' for repo index 'https://conda.anaconda.org/bioconda/linux-64'
info libmamba Attempt load from solv "/lustre/BIF/nobackup/worku005/bin/miniconda3/pkgs/cache/ffeee55f.solv"
info libmamba Metadata solv file: https://conda.anaconda.org/bioconda/linux-64/repodata.json 1 W/"764c3dd2fa17f8f2a9e1af7c8608255e-4" Mon, 08 May 2023 09:29:52 GMT 1.1_0.7.23
info libmamba Metadata from SOLV are valid
Channel: bioconda[linux-64,noarch], platform: noarch, prio: 3 : 0
Cache path: /lustre/BIF/nobackup/worku005/bin/miniconda3/pkgs/cache/2a957770.solv
info libmamba Reading cache files '/lustre/BIF/nobackup/worku005/bin/miniconda3/pkgs/cache/2a957770.solv.*' for repo index 'https://conda.anaconda.org/bioconda/noarch'
info libmamba Attempt load from solv "/lustre/BIF/nobackup/worku005/bin/miniconda3/pkgs/cache/2a957770.solv"
info libmamba Metadata solv file: https://conda.anaconda.org/bioconda/noarch/repodata.json 1 W/"5b6b4ae7ae9761c841fc6092e2e4455f-4" Mon, 08 May 2023 12:29:00 GMT 1.1_0.7.23
info libmamba Metadata from SOLV are valid
Channel: pkgs/main[linux-64,noarch], platform: linux-64, prio: 2 : 0
Cache path: /lustre/BIF/nobackup/worku005/bin/miniconda3/pkgs/cache/47929eba.solv
info libmamba Reading cache files '/lustre/BIF/nobackup/worku005/bin/miniconda3/pkgs/cache/47929eba.solv.*' for repo index 'https://repo.anaconda.com/pkgs/main/linux-64'
info libmamba Attempt load from solv "/lustre/BIF/nobackup/worku005/bin/miniconda3/pkgs/cache/47929eba.solv"
info libmamba Metadata solv file: https://repo.anaconda.com/pkgs/main/linux-64/repodata.json 1 W/"e65e8a0b7ce1c0bf7097ac30afcd3eb7" Mon, 08 May 2023 13:36:27 GMT 1.1_0.7.23
info libmamba Metadata from SOLV are valid
Channel: pkgs/main[linux-64,noarch], platform: noarch, prio: 2 : 0
Cache path: /lustre/BIF/nobackup/worku005/bin/miniconda3/pkgs/cache/3e39a7aa.solv
info libmamba Reading cache files '/lustre/BIF/nobackup/worku005/bin/miniconda3/pkgs/cache/3e39a7aa.solv.*' for repo index 'https://repo.anaconda.com/pkgs/main/noarch'
info libmamba Attempt load from solv "/lustre/BIF/nobackup/worku005/bin/miniconda3/pkgs/cache/3e39a7aa.solv"
info libmamba Metadata solv file: https://repo.anaconda.com/pkgs/main/noarch/repodata.json 1 W/"63800786928d9899a0a0f6d161e32083" Mon, 01 May 2023 19:03:05 GMT 1.1_0.7.23
info libmamba Metadata from SOLV are valid
Channel: pkgs/r[linux-64,noarch], platform: linux-64, prio: 1 : 0
Cache path: /lustre/BIF/nobackup/worku005/bin/miniconda3/pkgs/cache/2ce54b42.solv
info libmamba Reading cache files '/lustre/BIF/nobackup/worku005/bin/miniconda3/pkgs/cache/2ce54b42.solv.*' for repo index 'https://repo.anaconda.com/pkgs/r/linux-64'
info libmamba Attempt load from solv "/lustre/BIF/nobackup/worku005/bin/miniconda3/pkgs/cache/2ce54b42.solv"
info libmamba Metadata solv file: https://repo.anaconda.com/pkgs/r/linux-64/repodata.json 1 W/"ba836b3510aff2e8ebc178babf77105f" Fri, 19 Aug 2022 21:27:15 GMT 1.1_0.7.23
info libmamba Metadata from SOLV are valid
Channel: pkgs/r[linux-64,noarch], platform: noarch, prio: 1 : 0
Cache path: /lustre/BIF/nobackup/worku005/bin/miniconda3/pkgs/cache/4ea078d6.solv
info libmamba Reading cache files '/lustre/BIF/nobackup/worku005/bin/miniconda3/pkgs/cache/4ea078d6.solv.*' for repo index 'https://repo.anaconda.com/pkgs/r/noarch'
info libmamba Attempt load from solv "/lustre/BIF/nobackup/worku005/bin/miniconda3/pkgs/cache/4ea078d6.solv"
info libmamba Metadata solv file: https://repo.anaconda.com/pkgs/r/noarch/repodata.json 1 W/"93476d5e7aa8d3f8bc0c04afafc94d26" Fri, 28 Oct 2022 15:33:23 GMT 1.1_0.7.23
info libmamba Metadata from SOLV are valid
info libmamba Parsing MatchSpec r-base=3.4.3
info libmamba Parsing MatchSpec r-base=3.4.3
info libmamba Adding job: r-base=3.4.3
info libmamba Problem count: 1
info libmamba Parsing MatchSpec r-base 3.4.3**
warning libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
warning libmamba Problem type not implemented SOLVER_RULE_STRICT_REPO_PRIORITY
Could not solve for environment specs
The following package could not be installed
└─ r-base 3.4.3** is uninstallable because it conflicts with any installable versions previously reported.
info libmamba Freeing solver.
info libmamba Freeing pool.
environment.yml
No response
~/.condarc
channels:
- conda-forge
- bioconda
- defaults
auto_activate_base: false
channel_priority: strict
