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20 hours ago โข
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[mamba stops working ๐ ๏ธ] ImportError: DLL load failed while importing bindings: The specified procedure could not be found.
Main issue gist
Mamba stops working after installing geopandas (installing geopandas successfully using mamba itself).
How/what went wrong:
Trying to install geospatial, following basic steps in documentation:
- Creating new env with conda: successful. :heavy_check_mark:
- Installing mamba in env using coda: installed successfully and works. :heavy_check_mark:
- Installing geopandas in same env using mamba: mamba works and geopandas installed successfully. :heavy_check_mark:
- Checking if mamba still works (trying to do anything): Fails. > ImportError: DLL load failed while importing bindings. :x:
Main error:
Happens when executing any mamba commend, demonstrated here through mamba list.
(error message is in french but it's what the issue title says)
(geospatial) PS C:\Users\DELL> mamba list
Traceback (most recent call last):
File "C:\ProgramData\Anaconda3\envs\geospatial\Scripts\mamba-script.py", line 6, in <module>
from mamba.mamba import main
File "C:\ProgramData\Anaconda3\envs\geospatial\lib\site-packages\mamba\mamba.py", line 49, in <module>
import libmambapy as api
File "C:\ProgramData\Anaconda3\envs\geospatial\lib\site-packages\libmambapy\__init__.py", line 7, in <module>
raise e
File "C:\ProgramData\Anaconda3\envs\geospatial\lib\site-packages\libmambapy\__init__.py", line 4, in <module>
from libmambapy.bindings import * # noqa: F401,F403
ImportError: DLL load failed while importing bindings: La procรฉdure spรฉcifiรฉe est introuvable.
(geospatial) PS C:\Users\DELL>
Additional info:
- OS: Windows10 (win64)
- Conda version: 4.13.0
- Conda-build: 3.21.4
- Python (env): 3.9.12
- Mamba 0.24.0
- Geopandas: 0.9.0
I already faced this very issue the day before, following the same procedure. In this session, I tried to start again from scratch, cleaned up the mess (deleted previous env), started new env and followed same steps and got the same error.
PS: Looked into closed #249 but nothing usefull.
Full session log:
The following is the full log of the same work session from creating the env to testing mamba:
Click to expand full log
Windows PowerShell
Copyright (C) Microsoft Corporation. Tous droits rรฉservรฉs.
Le chargement des profils personnels et systรจme a durรฉ 1615 ms.
(base) PS C:\Users\DELL> conda create -n geospatial python=3.9
WARNING: A directory already exists at the target location 'C:\ProgramData\Anaconda3\envs\geospatial'
but it is not a conda environment.
Continue creating environment (y/[n])? n
CondaSystemExit: Exiting.
(base) PS C:\Users\DELL> conda create -n geospatial python=3.9
Collecting package metadata (current_repodata.json): done
Solving environment: done
## Package Plan ##
environment location: C:\ProgramData\Anaconda3\envs\geospatial
added / updated specs:
- python=3.9
The following NEW packages will be INSTALLED:
ca-certificates pkgs/main/win-64::ca-certificates-2022.4.26-haa95532_0
certifi pkgs/main/win-64::certifi-2022.5.18.1-py39haa95532_0
openssl pkgs/main/win-64::openssl-1.1.1o-h2bbff1b_0
pip pkgs/main/win-64::pip-21.2.4-py39haa95532_0
python pkgs/main/win-64::python-3.9.12-h6244533_0
setuptools pkgs/main/win-64::setuptools-61.2.0-py39haa95532_0
sqlite pkgs/main/win-64::sqlite-3.38.3-h2bbff1b_0
tzdata pkgs/main/noarch::tzdata-2022a-hda174b7_0 vc pkgs/main/win-64::vc-14.2-h21ff451_1
vs2015_runtime pkgs/main/win-64::vs2015_runtime-14.27.29016-h5e58377_2
wheel pkgs/main/noarch::wheel-0.37.1-pyhd3eb1b0_0
wincertstore pkgs/main/win-64::wincertstore-0.2-py39haa95532_2
Proceed ([y]/n)? y
Preparing transaction: done
Verifying transaction: done
Executing transaction: done
#
# To activate this environment, use
#
# $ conda activate geospatial
#
# To deactivate an active environment, use
#
# $ conda deactivate
(base) PS C:\Users\DELL> conda activate geospatial
(geospatial) PS C:\Users\DELL> conda install -c conda-forge mamba
Collecting package metadata (current_repodata.json): done
Solving environment: done
## Package Plan ##
environment location: C:\ProgramData\Anaconda3\envs\geospatial
added / updated specs:
- mamba
The following NEW packages will be INSTALLED:
brotlipy conda-forge/win-64::brotlipy-0.7.0-py39hb82d6ee_1004
bzip2 conda-forge/win-64::bzip2-1.0.8-h8ffe710_4
cffi conda-forge/win-64::cffi-1.15.0-py39h0878f49_0
charset-normalizer conda-forge/noarch::charset-normalizer-2.0.12-pyhd8ed1ab_0
colorama conda-forge/noarch::colorama-0.4.4-pyh9f0ad1d_0
conda conda-forge/win-64::conda-4.12.0-py39hcbf5309_0
conda-package-han~ conda-forge/win-64::conda-package-handling-1.8.1-py39hb3671d1_1
cryptography conda-forge/win-64::cryptography-37.0.2-py39h7bc7c5c_0
idna conda-forge/noarch::idna-3.3-pyhd8ed1ab_0
krb5 conda-forge/win-64::krb5-1.19.3-h1176d77_0
libarchive conda-forge/win-64::libarchive-3.5.2-hb45042f_2
libcurl conda-forge/win-64::libcurl-7.83.1-h789b8ee_0
libiconv conda-forge/win-64::libiconv-1.16-he774522_0
libmamba conda-forge/win-64::libmamba-0.24.0-h81a967f_1
libmambapy conda-forge/win-64::libmambapy-0.24.0-py39h4126fcf_1
libsolv conda-forge/win-64::libsolv-0.7.22-h7755175_0
libssh2 conda-forge/win-64::libssh2-1.10.0-h680486a_2
libxml2 conda-forge/win-64::libxml2-2.9.14-hf5bbc77_0
libzlib conda-forge/win-64::libzlib-1.2.12-h8ffe710_0
lz4-c conda-forge/win-64::lz4-c-1.9.3-h8ffe710_1
lzo conda-forge/win-64::lzo-2.10-he774522_1000
mamba conda-forge/win-64::mamba-0.24.0-py39hb3d9227_1
menuinst conda-forge/win-64::menuinst-1.4.18-py39hcbf5309_1
pybind11-abi conda-forge/noarch::pybind11-abi-4-hd8ed1ab_3
pycosat conda-forge/win-64::pycosat-0.6.3-py39hb82d6ee_1010
pycparser conda-forge/noarch::pycparser-2.21-pyhd8ed1ab_0
pysocks conda-forge/win-64::pysocks-1.7.1-py39hcbf5309_5
python_abi conda-forge/win-64::python_abi-3.9-2_cp39
pywin32 conda-forge/win-64::pywin32-303-py39hb82d6ee_0
reproc conda-forge/win-64::reproc-14.2.3-h8ffe710_0
reproc-cpp conda-forge/win-64::reproc-cpp-14.2.3-h0e60522_0
requests conda-forge/noarch::requests-2.27.1-pyhd8ed1ab_0
ruamel_yaml conda-forge/win-64::ruamel_yaml-0.15.80-py39hb82d6ee_1007
six conda-forge/noarch::six-1.16.0-pyh6c4a22f_0
tqdm conda-forge/noarch::tqdm-4.64.0-pyhd8ed1ab_0
urllib3 conda-forge/noarch::urllib3-1.26.9-pyhd8ed1ab_0
win_inet_pton conda-forge/win-64::win_inet_pton-1.1.0-py39hcbf5309_4
xz conda-forge/win-64::xz-5.2.5-h62dcd97_1
yaml conda-forge/win-64::yaml-0.2.5-h8ffe710_2
yaml-cpp conda-forge/win-64::yaml-cpp-0.7.0-h0e60522_1
zlib conda-forge/win-64::zlib-1.2.12-h8ffe710_0
zstd conda-forge/win-64::zstd-1.5.2-h6255e5f_1
The following packages will be UPDATED:
ca-certificates pkgs/main::ca-certificates-2022.4.26-~ --> conda-forge::ca-certificates-2022.5.18.1-h5b45459_0
The following packages will be SUPERSEDED by a higher-priority channel:
certifi pkgs/main::certifi-2022.5.18.1-py39ha~ --> conda-forge::certifi-2022.5.18.1-py39hcbf5309_0
openssl pkgs/main::openssl-1.1.1o-h2bbff1b_0 --> conda-forge::openssl-1.1.1o-h8ffe710_0
Proceed ([y]/n)? y
Preparing transaction: done
Verifying transaction: done
Executing transaction: done
(geospatial) PS C:\Users\DELL> mamba install geopandas
menuinst called from non-root env C:\ProgramData\Anaconda3\envs\geospatial
__ __ __ __
/ \ / \ / \ / \
/ \/ \/ \/ \
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/ / \ / \ / \ / \ \____
/ / \_/ \_/ \_/ \ o \__,
/ _/ \_____/ `
|/
โโโโ โโโโ โโโโโโ โโโโ โโโโโโโโโโโ โโโโโโ
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โโโ โโโ โโโโโโ โโโโโโ โโโ โโโโโโโโโโโโโโ โโโ
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mamba (0.24.0) supported by @QuantStack
GitHub: https://github.com/mamba-org/mamba
Twitter: https://twitter.com/QuantStack
โโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโ
Looking for: ['geopandas']
pkgs/r/win-64 No change
pkgs/msys2/win-64 No change
pkgs/msys2/noarch No change
pkgs/r/noarch 495.9kB @ 533.0kB/s 1.0s
pkgs/main/noarch 810.1kB @ 527.4kB/s 1.6s
pkgs/main/win-64 4.0MB @ 1.2MB/s 3.8s
Pinned packages:
- python 3.9.*
Transaction
Prefix: C:\ProgramData\Anaconda3\envs\geospatial
Updating specs:
- geopandas
- ca-certificates
- certifi
- openssl
Package Version Build Channel Size
-----------------------------------------------------------------------------------------------
Install:
-----------------------------------------------------------------------------------------------
+ attrs 21.4.0 pyhd3eb1b0_0 pkgs/main/noarch 52kB
+ blas 1.0 mkl pkgs/main/win-64 6kB
+ bottleneck 1.3.4 py39h080aedc_0 pkgs/main/win-64 111kB
+ brotli 1.0.9 ha925a31_2 pkgs/main/win-64 340kB
+ cfitsio 3.470 he774522_6 pkgs/main/win-64 524kB
+ click 7.1.2 pyhd3eb1b0_0 pkgs/main/noarch 65kB
+ click-plugins 1.1.1 pyhd3eb1b0_0 pkgs/main/noarch 10kB
+ cligj 0.7.2 pyhd3eb1b0_0 pkgs/main/noarch 11kB
+ curl 7.55.1 h3b839b5_4 pkgs/main/win-64 322kB
+ cycler 0.11.0 pyhd3eb1b0_0 pkgs/main/noarch 13kB
+ expat 2.4.4 h6c2663c_0 pkgs/main/win-64 212kB
+ fiona 1.8.13.post1 py39h758c064_0 pkgs/main/win-64 632kB
+ fonttools 4.25.0 pyhd3eb1b0_0 pkgs/main/noarch 648kB
+ freetype 2.10.4 hd328e21_0 pkgs/main/win-64 Cached
+ freexl 1.0.6 h2bbff1b_0 pkgs/main/win-64 52kB
+ gdal 3.0.2 py39hb978731_2 pkgs/main/win-64 1MB
+ geopandas 0.9.0 py_1 pkgs/main/noarch 10kB
+ geopandas-base 0.9.0 py_1 pkgs/main/noarch 941kB
+ geos 3.8.0 h33f27b4_0 pkgs/main/win-64 927kB
+ geotiff 1.7.0 h4545760_0 pkgs/main/win-64 125kB
+ hdf4 4.2.13 h712560f_2 pkgs/main/win-64 1MB
+ hdf5 1.10.6 h7ebc959_0 pkgs/main/win-64 8MB
+ icc_rt 2019.0.0 h0cc432a_1 pkgs/main/win-64 6MB
+ intel-openmp 2021.4.0 haa95532_3556 pkgs/main/win-64 2MB
+ joblib 1.1.0 pyhd3eb1b0_0 pkgs/main/noarch 216kB
+ jpeg 9e h2bbff1b_0 pkgs/main/win-64 299kB
+ kealib 1.4.14 hde4a422_1 pkgs/main/win-64 144kB
+ kiwisolver 1.4.2 py39hd77b12b_0 pkgs/main/win-64 60kB
+ libgdal 3.0.2 h3d7c30d_2 pkgs/main/win-64 7MB
+ libnetcdf 4.8.1 h6685c40_1 pkgs/main/win-64 604kB
+ libpng 1.6.37 h2a8f88b_0 pkgs/main/win-64 Cached
+ libpq 12.9 hb652d5d_1 pkgs/main/win-64 3MB
+ libspatialindex 1.9.3 h6c2663c_0 pkgs/main/win-64 359kB
+ libspatialite 4.3.0a h14feca5_20 pkgs/main/win-64 2MB
+ libtiff 4.2.0 he0120a3_1 pkgs/main/win-64 772kB
+ libwebp 1.2.2 h2bbff1b_0 pkgs/main/win-64 674kB
+ libzip 1.8.0 h49b8836_0 pkgs/main/win-64 97kB
+ m2w64-expat 2.1.1 2 pkgs/msys2/win-64 163kB
+ m2w64-gcc-libgfortran 5.3.0 6 pkgs/msys2/win-64 349kB
+ m2w64-gcc-libs 5.3.0 7 pkgs/msys2/win-64 531kB
+ m2w64-gcc-libs-core 5.3.0 7 pkgs/msys2/win-64 218kB
+ m2w64-gettext 0.19.7 2 pkgs/msys2/win-64 4MB
+ m2w64-gmp 6.1.0 2 pkgs/msys2/win-64 706kB
+ m2w64-libiconv 1.14 6 pkgs/msys2/win-64 2MB
+ m2w64-libwinpthread-git 5.0.0.4634.697f757 2 pkgs/msys2/win-64 31kB
+ m2w64-xz 5.2.2 2 pkgs/msys2/win-64 405kB
+ mapclassify 2.4.3 pyhd3eb1b0_0 pkgs/main/noarch 37kB
+ matplotlib-base 3.5.1 py39hd77b12b_1 pkgs/main/win-64 6MB
+ mkl 2021.4.0 haa95532_640 pkgs/main/win-64 120MB
+ mkl-service 2.4.0 py39h2bbff1b_0 pkgs/main/win-64 52kB
+ mkl_fft 1.3.1 py39h277e83a_0 pkgs/main/win-64 142kB
+ mkl_random 1.2.2 py39hf11a4ad_0 pkgs/main/win-64 230kB
+ msys2-conda-epoch 20160418 1 pkgs/msys2/win-64 2kB
+ munch 2.5.0 pyhd3eb1b0_0 pkgs/main/noarch 14kB
+ munkres 1.1.4 py_0 pkgs/main/noarch 14kB
+ networkx 2.7.1 pyhd3eb1b0_0 pkgs/main/noarch 1MB
+ numexpr 2.8.1 py39hb80d3ca_0 pkgs/main/win-64 120kB
+ numpy 1.22.3 py39h7a0a035_0 pkgs/main/win-64 26kB
+ numpy-base 1.22.3 py39hca35cd5_0 pkgs/main/win-64 5MB
+ openjpeg 2.4.0 h4fc8c34_0 pkgs/main/win-64 224kB
+ packaging 21.3 pyhd3eb1b0_0 pkgs/main/noarch 37kB
+ pandas 1.4.2 py39hd77b12b_0 pkgs/main/win-64 9MB
+ pillow 9.0.1 py39hdc2b20a_0 pkgs/main/win-64 943kB
+ proj 6.2.1 h3758d61_0 pkgs/main/win-64 8MB
+ pyparsing 3.0.4 pyhd3eb1b0_0 pkgs/main/noarch 83kB
+ pyproj 2.6.1.post1 py39h593ac45_1 pkgs/main/win-64 328kB
+ python-dateutil 2.8.2 pyhd3eb1b0_0 pkgs/main/noarch 238kB
+ pytz 2021.3 pyhd3eb1b0_0 pkgs/main/noarch 175kB
+ rtree 0.9.7 py39h2eaa2aa_1 pkgs/main/win-64 50kB
+ scikit-learn 1.0.2 py39hf11a4ad_1 pkgs/main/win-64 5MB
+ scipy 1.7.3 py39h0a974cb_0 pkgs/main/win-64 15MB
+ shapely 1.7.1 py39h06580b3_0 pkgs/main/win-64 381kB
+ threadpoolctl 2.2.0 pyh0d69192_0 pkgs/main/noarch 17kB
+ tiledb 2.3.3 hc23ccdf_1 pkgs/main/win-64 2MB
+ tk 8.6.12 h2bbff1b_0 pkgs/main/win-64 3MB
+ xerces-c 3.2.3 ha925a31_0 pkgs/main/win-64 3MB
Summary:
Install: 76 packages
Total download: 230MB
-----------------------------------------------------------------------------------------------
Confirm changes: [Y/n] y
blas 6.4kB @ 11.0kB/s 0.6s
jpeg 298.8kB @ 136.5kB/s 2.2s
kiwisolver 59.7kB @ 25.7kB/s 2.3s
libzip 96.8kB @ 40.8kB/s 0.2s
libwebp 673.6kB @ 237.3kB/s 2.3s
intel-openmp 2.3MB @ 275.3kB/s 8.3s
pyproj 327.5kB @ 32.8kB/s 1.7s
geotiff 125.2kB @ 11.8kB/s 0.6s
geos 926.7kB @ 69.7kB/s 13.3s
libnetcdf 603.9kB @ 44.3kB/s 3.0s
bottleneck 111.1kB @ 7.6kB/s 1.0s
mkl_fft 142.2kB @ 9.1kB/s 2.4s
pytz 174.6kB @ 10.9kB/s 1.4s
attrs 51.8kB @ 3.2kB/s 0.4s
threadpoolctl 16.7kB @ 1.0kB/s 0.2s
hdf5 8.3MB @ 509.9kB/s 13.5s
cligj 11.2kB @ 678.0 B/s 0.3s
m2w64-libwinpthread-git 30.5kB @ 1.8kB/s 0.2s
m2w64-gcc-libs-core 217.7kB @ 12.8kB/s 0.5s
joblib 215.6kB @ 12.4kB/s 1.4s
m2w64-expat 163.5kB @ 8.6kB/s 2.5s
fiona 632.1kB @ 25.4kB/s 6.4s
tiledb 2.1MB @ 81.7kB/s 23.2s
geopandas 10.0kB @ 391.0 B/s 0.7s
brotli 339.6kB @ 12.4kB/s 1.8s
expat 211.9kB @ 7.4kB/s 1.2s
scikit-learn 5.3MB @ 156.3kB/s 17.0s
hdf4 1.4MB @ 39.4kB/s 7.3s
xerces-c 3.0MB @ 73.9kB/s 14.8s
numpy 25.9kB @ 634.0 B/s 0.5s
libspatialite 2.4MB @ 55.9kB/s 10.0s
pillow 943.3kB @ 21.4kB/s 8.2s
pyparsing 82.5kB @ 1.9kB/s 1.1s
packaging 37.3kB @ 839.0 B/s 0.3s
shapely 381.5kB @ 8.6kB/s 3.7s
munkres 13.6kB @ 299.0 B/s 1.2s
libgdal 7.3MB @ 162.1kB/s 27.9s
numexpr 120.3kB @ 2.6kB/s 0.6s
m2w64-gmp 705.6kB @ 15.3kB/s 1.6s
freexl 52.3kB @ 1.1kB/s 0.4s
m2w64-gcc-libs 530.6kB @ 11.4kB/s 1.9s
rtree 50.5kB @ 1.1kB/s 0.6s
libspatialindex 359.3kB @ 7.4kB/s 2.2s
kealib 143.7kB @ 2.8kB/s 4.7s
tk 3.2MB @ 57.6kB/s 10.0s
fonttools 647.6kB @ 11.3kB/s 1.4s
m2w64-libiconv 1.5MB @ 24.3kB/s 5.9s
m2w64-xz 404.8kB @ 6.3kB/s 1.2s
mapclassify 36.7kB @ 564.0 B/s 0.6s
networkx 1.4MB @ 19.3kB/s 20.3s
proj 8.3MB @ 75.2kB/s 38.0s
icc_rt 6.3MB @ 56.8kB/s 45.3s
openjpeg 224.5kB @ 2.0kB/s 0.8s
munch 13.6kB @ 122.0 B/s 0.2s
python-dateutil 238.1kB @ 2.1kB/s 1.5s
scipy 14.6MB @ 130.1kB/s 1m:3.7s
mkl-service 51.9kB @ 460.0 B/s 0.4s
cycler 12.6kB @ 111.0 B/s 0.2s
curl 322.0kB @ 2.9kB/s 1.0s
msys2-conda-epoch 2.1kB @ 18.0 B/s 0.5s
gdal 1.1MB @ 9.4kB/s 2.1s
click 65.2kB @ 567.0 B/s 0.8s
libtiff 771.7kB @ 6.7kB/s 2.2s
geopandas-base 941.2kB @ 8.1kB/s 2.6s
libpq 2.9MB @ 22.6kB/s 11.2s
mkl_random 230.3kB @ 1.8kB/s 0.6s
matplotlib-base 5.9MB @ 41.4kB/s 27.3s
numpy-base 5.1MB @ 35.7kB/s 26.7s
click-plugins 10.3kB @ 72.0 B/s 0.1s
pandas 9.1MB @ 63.8kB/s 1m:37.3s
cfitsio 524.4kB @ 3.6kB/s 1.5s
m2w64-gettext 4.4MB @ 30.3kB/s 16.6s
mkl 120.4MB @ 464.2kB/s 4m:17.1s
Preparing transaction: done
Verifying transaction: done
Executing transaction: \
Windows 64-bit packages of scikit-learn can be accelerated using scikit-learn-intelex.
More details are available here: https://intel.github.io/scikit-learn-intelex
For example:
$ conda install scikit-learn-intelex
$ python -m sklearnex my_application.py
done
(geospatial) PS C:\Users\DELL> mamba list
Traceback (most recent call last):
File "C:\ProgramData\Anaconda3\envs\geospatial\Scripts\mamba-script.py", line 6, in <module>
from mamba.mamba import main
File "C:\ProgramData\Anaconda3\envs\geospatial\lib\site-packages\mamba\mamba.py", line 49, in <module>
import libmambapy as api
File "C:\ProgramData\Anaconda3\envs\geospatial\lib\site-packages\libmambapy\__init__.py", line 7, in <module>
raise e
File "C:\ProgramData\Anaconda3\envs\geospatial\lib\site-packages\libmambapy\__init__.py", line 4, in <module>
from libmambapy.bindings import * # noqa: F401,F403
ImportError: DLL load failed while importing bindings: La procรฉdure spรฉcifiรฉe est introuvable.
(geospatial) PS C:\Users\DELL>
Trying a fix
I tried updating mamba but the error persisted:
- conda update mamba: some packages were downloaded and installed successfully :heavy_check_mark:
- mamba still not working. same error. :x:
Fix attempt log:
Click to expand!
(geospatial) PS C:\Users\DELL> conda list
# packages in environment at C:\ProgramData\Anaconda3\envs\geospatial:
#
# Name Version Build Channel
attrs 21.4.0 pyhd3eb1b0_0
blas 1.0 mkl
bottleneck 1.3.4 py39h080aedc_0
brotli 1.0.9 ha925a31_2
brotlipy 0.7.0 py39hb82d6ee_1004 conda-forge
bzip2 1.0.8 h8ffe710_4 conda-forge
ca-certificates 2022.5.18.1 h5b45459_0 conda-forge
certifi 2022.5.18.1 py39hcbf5309_0 conda-forge
cffi 1.15.0 py39h0878f49_0 conda-forge
cfitsio 3.470 he774522_6
charset-normalizer 2.0.12 pyhd8ed1ab_0 conda-forge
click 7.1.2 pyhd3eb1b0_0
click-plugins 1.1.1 pyhd3eb1b0_0
cligj 0.7.2 pyhd3eb1b0_0
colorama 0.4.4 pyh9f0ad1d_0 conda-forge
conda 4.12.0 py39hcbf5309_0 conda-forge
conda-package-handling 1.8.1 py39hb3671d1_1 conda-forge
cryptography 37.0.2 py39h7bc7c5c_0 conda-forge
curl 7.55.1 h3b839b5_4
cycler 0.11.0 pyhd3eb1b0_0
expat 2.4.4 h6c2663c_0
fiona 1.8.13.post1 py39h758c064_0
fonttools 4.25.0 pyhd3eb1b0_0
freetype 2.10.4 hd328e21_0
freexl 1.0.6 h2bbff1b_0
gdal 3.0.2 py39hb978731_2
geopandas 0.9.0 py_1
geopandas-base 0.9.0 py_1
geos 3.8.0 h33f27b4_0
geotiff 1.7.0 h4545760_0
hdf4 4.2.13 h712560f_2
hdf5 1.10.6 h7ebc959_0
icc_rt 2019.0.0 h0cc432a_1
idna 3.3 pyhd8ed1ab_0 conda-forge
intel-openmp 2021.4.0 haa95532_3556
joblib 1.1.0 pyhd3eb1b0_0
jpeg 9e h2bbff1b_0
kealib 1.4.14 hde4a422_1
kiwisolver 1.4.2 py39hd77b12b_0
krb5 1.19.3 h1176d77_0 conda-forge
libarchive 3.5.2 hb45042f_2 conda-forge
libcurl 7.83.1 h789b8ee_0 conda-forge
libgdal 3.0.2 h3d7c30d_2
libiconv 1.16 he774522_0 conda-forge
libmamba 0.24.0 h81a967f_1 conda-forge
libmambapy 0.24.0 py39h4126fcf_1 conda-forge
libnetcdf 4.8.1 h6685c40_1
libpng 1.6.37 h2a8f88b_0
libpq 12.9 hb652d5d_1
libsolv 0.7.22 h7755175_0 conda-forge
libspatialindex 1.9.3 h6c2663c_0
libspatialite 4.3.0a h14feca5_20
libssh2 1.10.0 h680486a_2 conda-forge
libtiff 4.2.0 he0120a3_1
libwebp 1.2.2 h2bbff1b_0
libxml2 2.9.14 hf5bbc77_0 conda-forge
libzip 1.8.0 h49b8836_0
libzlib 1.2.12 h8ffe710_0 conda-forge
lz4-c 1.9.3 h8ffe710_1 conda-forge
lzo 2.10 he774522_1000 conda-forge
m2w64-expat 2.1.1 2
m2w64-gcc-libgfortran 5.3.0 6
m2w64-gcc-libs 5.3.0 7
m2w64-gcc-libs-core 5.3.0 7
m2w64-gettext 0.19.7 2
m2w64-gmp 6.1.0 2
m2w64-libiconv 1.14 6
m2w64-libwinpthread-git 5.0.0.4634.697f757 2
m2w64-xz 5.2.2 2
mamba 0.24.0 py39hb3d9227_1 conda-forge
mapclassify 2.4.3 pyhd3eb1b0_0
matplotlib-base 3.5.1 py39hd77b12b_1
menuinst 1.4.18 py39hcbf5309_1 conda-forge
mkl 2021.4.0 haa95532_640
mkl-service 2.4.0 py39h2bbff1b_0
mkl_fft 1.3.1 py39h277e83a_0
mkl_random 1.2.2 py39hf11a4ad_0
msys2-conda-epoch 20160418 1
munch 2.5.0 pyhd3eb1b0_0
munkres 1.1.4 py_0
networkx 2.7.1 pyhd3eb1b0_0
numexpr 2.8.1 py39hb80d3ca_0
numpy 1.22.3 py39h7a0a035_0
numpy-base 1.22.3 py39hca35cd5_0
openjpeg 2.4.0 h4fc8c34_0
openssl 1.1.1o h8ffe710_0 conda-forge
packaging 21.3 pyhd3eb1b0_0
pandas 1.4.2 py39hd77b12b_0
pillow 9.0.1 py39hdc2b20a_0
pip 21.2.4 py39haa95532_0
proj 6.2.1 h3758d61_0
pybind11-abi 4 hd8ed1ab_3 conda-forge
pycosat 0.6.3 py39hb82d6ee_1010 conda-forge
pycparser 2.21 pyhd8ed1ab_0 conda-forge
pyopenssl 22.0.0 pyhd8ed1ab_0 conda-forge
pyparsing 3.0.4 pyhd3eb1b0_0
pyproj 2.6.1.post1 py39h593ac45_1
pysocks 1.7.1 py39hcbf5309_5 conda-forge
python-dateutil 2.8.2 pyhd3eb1b0_0
python_abi 3.9 2_cp39 conda-forge
pytz 2021.3 pyhd3eb1b0_0
pywin32 303 py39hb82d6ee_0 conda-forge
reproc 14.2.3 h8ffe710_0 conda-forge
reproc-cpp 14.2.3 h0e60522_0 conda-forge
requests 2.27.1 pyhd8ed1ab_0 conda-forge
rtree 0.9.7 py39h2eaa2aa_1
ruamel_yaml 0.15.80 py39hb82d6ee_1007 conda-forge
scikit-learn 1.0.2 py39hf11a4ad_1
setuptools 61.2.0 py39haa95532_0
shapely 1.7.1 py39h06580b3_0
six 1.16.0 pyh6c4a22f_0 conda-forge
sqlite 3.38.3 h2bbff1b_0
threadpoolctl 2.2.0 pyh0d69192_0
tiledb 2.3.3 hc23ccdf_1
tk 8.6.12 h2bbff1b_0
tqdm 4.64.0 pyhd8ed1ab_0 conda-forge
tzdata 2022a hda174b7_0
urllib3 1.26.9 pyhd8ed1ab_0 conda-forge
vc 14.2 h21ff451_1
vs2015_runtime 14.27.29016 h5e58377_2
wheel 0.37.1 pyhd3eb1b0_0
win_inet_pton 1.1.0 py39hcbf5309_4 conda-forge
wincertstore 0.2 py39haa95532_2
xerces-c 3.2.3 ha925a31_0
xz 5.2.5 h62dcd97_1 conda-forge
yaml 0.2.5 h8ffe710_2 conda-forge
yaml-cpp 0.7.0 h0e60522_1 conda-forge
zlib 1.2.12 h8ffe710_0 conda-forge
zstd 1.5.2 h6255e5f_1 conda-forge
(geospatial) PS C:\Users\DELL> mamba
Traceback (most recent call last):
File "C:\ProgramData\Anaconda3\envs\geospatial\Scripts\mamba-script.py", line 6, in <module>
from mamba.mamba import main
File "C:\ProgramData\Anaconda3\envs\geospatial\lib\site-packages\mamba\mamba.py", line 49, in <module>
import libmambapy as api
File "C:\ProgramData\Anaconda3\envs\geospatial\lib\site-packages\libmambapy\__init__.py", line 7, in <module>
raise e
File "C:\ProgramData\Anaconda3\envs\geospatial\lib\site-packages\libmambapy\__init__.py", line 4, in <module>
from libmambapy.bindings import * # noqa: F401,F403
ImportError: DLL load failed while importing bindings: La procรฉdure spรฉcifiรฉe est introuvable.
(geospatial) PS C:\Users\DELL> conda update mamba
Collecting package metadata (current_repodata.json): done
Solving environment: done
## Package Plan ##
environment location: C:\ProgramData\Anaconda3\envs\geospatial
added / updated specs:
- mamba
The following packages will be downloaded:
package | build
---------------------------|-----------------
libarchive-3.5.2 | h214662b_0 781 KB
reproc-14.2.4 | hd77b12b_1 33 KB
reproc-cpp-14.2.4 | hd77b12b_1 27 KB
yaml-cpp-0.7.0 | hd77b12b_1 1.8 MB
------------------------------------------------------------
Total: 2.6 MB
The following packages will be REMOVED:
lzo-2.10-he774522_1000
The following packages will be UPDATED:
cffi conda-forge::cffi-1.15.0-py39h0878f49~ --> pkgs/main::cffi-1.15.0-py39h2bbff1b_1
libiconv conda-forge::libiconv-1.16-he774522_0 --> pkgs/main::libiconv-1.16-h2bbff1b_2
reproc conda-forge::reproc-14.2.3-h8ffe710_0 --> pkgs/main::reproc-14.2.4-hd77b12b_1
reproc-cpp conda-forge::reproc-cpp-14.2.3-h0e605~ --> pkgs/main::reproc-cpp-14.2.4-hd77b12b_1
ruamel_yaml conda-forge::ruamel_yaml-0.15.80-py39~ --> pkgs/main::ruamel_yaml-0.15.100-py39h2bbff1b_0
six conda-forge::six-1.16.0-pyh6c4a22f_0 --> pkgs/main::six-1.16.0-pyhd3eb1b0_1
The following packages will be SUPERSEDED by a higher-priority channel:
brotlipy conda-forge::brotlipy-0.7.0-py39hb82d~ --> pkgs/main::brotlipy-0.7.0-py39h2bbff1b_1003
bzip2 conda-forge::bzip2-1.0.8-h8ffe710_4 --> pkgs/main::bzip2-1.0.8-he774522_0
ca-certificates conda-forge::ca-certificates-2022.5.1~ --> pkgs/main::ca-certificates-2022.4.26-haa95532_0
certifi conda-forge::certifi-2022.5.18.1-py39~ --> pkgs/main::certifi-2022.5.18.1-py39haa95532_0
charset-normalizer conda-forge::charset-normalizer-2.0.1~ --> pkgs/main::charset-normalizer-2.0.4-pyhd3eb1b0_0
cligj pkgs/main/noarch::cligj-0.7.2-pyhd3eb~ --> pkgs/main/win-64::cligj-0.7.2-py39haa95532_0
colorama conda-forge::colorama-0.4.4-pyh9f0ad1~ --> pkgs/main::colorama-0.4.4-pyhd3eb1b0_0
conda-package-han~ conda-forge::conda-package-handling-1~ --> pkgs/main::conda-package-handling-1.8.1-py39h8cc25b3_0
cryptography conda-forge::cryptography-37.0.2-py39~ --> pkgs/main::cryptography-37.0.1-py39h21b164f_0
libarchive conda-forge::libarchive-3.5.2-hb45042~ --> pkgs/main::libarchive-3.5.2-h214662b_0
libssh2 conda-forge::libssh2-1.10.0-h680486a_2 --> pkgs/main::libssh2-1.10.0-hcd4344a_0
libxml2 conda-forge::libxml2-2.9.14-hf5bbc77_0 --> pkgs/main::libxml2-2.9.14-h0ad7f3c_0
lz4-c conda-forge::lz4-c-1.9.3-h8ffe710_1 --> pkgs/main::lz4-c-1.9.3-h2bbff1b_1
menuinst conda-forge::menuinst-1.4.18-py39hcbf~ --> pkgs/main::menuinst-1.4.18-py39h59b6b97_0
openssl conda-forge::openssl-1.1.1o-h8ffe710_0 --> pkgs/main::openssl-1.1.1o-h2bbff1b_0
pycosat conda-forge::pycosat-0.6.3-py39hb82d6~ --> pkgs/main::pycosat-0.6.3-py39h2bbff1b_0
pycparser conda-forge::pycparser-2.21-pyhd8ed1a~ --> pkgs/main::pycparser-2.21-pyhd3eb1b0_0
pyopenssl conda-forge::pyopenssl-22.0.0-pyhd8ed~ --> pkgs/main::pyopenssl-22.0.0-pyhd3eb1b0_0
pysocks conda-forge::pysocks-1.7.1-py39hcbf53~ --> pkgs/main::pysocks-1.7.1-py39haa95532_0
requests conda-forge::requests-2.27.1-pyhd8ed1~ --> pkgs/main::requests-2.27.1-pyhd3eb1b0_0
tqdm conda-forge/noarch::tqdm-4.64.0-pyhd8~ --> pkgs/main/win-64::tqdm-4.64.0-py39haa95532_0
urllib3 conda-forge/noarch::urllib3-1.26.9-py~ --> pkgs/main/win-64::urllib3-1.26.9-py39haa95532_0
win_inet_pton conda-forge::win_inet_pton-1.1.0-py39~ --> pkgs/main::win_inet_pton-1.1.0-py39haa95532_0
yaml conda-forge::yaml-0.2.5-h8ffe710_2 --> pkgs/main::yaml-0.2.5-he774522_0
yaml-cpp conda-forge::yaml-cpp-0.7.0-h0e60522_1 --> pkgs/main::yaml-cpp-0.7.0-hd77b12b_1
zstd conda-forge::zstd-1.5.2-h6255e5f_1 --> pkgs/main::zstd-1.5.2-h19a0ad4_0
Proceed ([y]/n)? y
Downloading and Extracting Packages
reproc-cpp-14.2.4 | 27 KB | ##################################################################################################### | 100%
yaml-cpp-0.7.0 | 1.8 MB | ##################################################################################################### | 100%
libarchive-3.5.2 | 781 KB | ##################################################################################################### | 100%
reproc-14.2.4 | 33 KB | ##################################################################################################### | 100%
Preparing transaction: done
Verifying transaction: done
Executing transaction: done
(geospatial) PS C:\Users\DELL> mamba list
Traceback (most recent call last):
File "C:\ProgramData\Anaconda3\envs\geospatial\Scripts\mamba-script.py", line 6, in <module>
from mamba.mamba import main
File "C:\ProgramData\Anaconda3\envs\geospatial\lib\site-packages\mamba\mamba.py", line 49, in <module>
import libmambapy as api
File "C:\ProgramData\Anaconda3\envs\geospatial\lib\site-packages\libmambapy\__init__.py", line 7, in <module>
raise e
File "C:\ProgramData\Anaconda3\envs\geospatial\lib\site-packages\libmambapy\__init__.py", line 4, in <module>
from libmambapy.bindings import * # noqa: F401,F403
ImportError: DLL load failed while importing bindings: La procรฉdure spรฉcifiรฉe est introuvable.
(geospatial) PS C:\Users\DELL>
Fix (working) but half measure
I tried removing mamba package and reinstalling it:
- conda remove mamba: successful :heavy_check_mark:
- conda install -c conda-forge mamba: successful :heavy_check_mark:
- mamba info: works successful :heavy_check_mark:
The half mesure:
An anterior version of mamba is installed (mamba 0.15.3) instead of the latest update (mamba 0.24.0) as when mamba was first installed before installing geopandas.
Re-installation log
Click to expand re-installation log
(geospatial) PS C:\Users\DELL> conda remove mamba
Collecting package metadata (repodata.json): done
Solving environment: done
## Package Plan ##
environment location: C:\ProgramData\Anaconda3\envs\geospatial
- mamba
The following packages will be REMOVED:
libarchive-3.5.2-h214662b_0
libmamba-0.24.0-h81a967f_1
libmambapy-0.24.0-py39h4126fcf_1
libsolv-0.7.22-h7755175_0
libzlib-1.2.12-h8ffe710_0
mamba-0.24.0-py39hb3d9227_1
pybind11-abi-4-hd8ed1ab_3
reproc-14.2.4-hd77b12b_1
reproc-cpp-14.2.4-hd77b12b_1
yaml-cpp-0.7.0-hd77b12b_1
The following packages will be UPDATED:
curl 7.55.1-h3b839b5_4 --> 7.82.0-h2bbff1b_0
zlib conda-forge::zlib-1.2.12-h8ffe710_0 --> pkgs/main::zlib-1.2.12-h8cc25b3_2
The following packages will be SUPERSEDED by a higher-priority channel:
krb5 conda-forge::krb5-1.19.3-h1176d77_0 --> pkgs/main::krb5-1.19.2-h5b6d351_0
libcurl conda-forge::libcurl-7.83.1-h789b8ee_0 --> pkgs/main::libcurl-7.82.0-h86230a5_0
Proceed ([y]/n)? y
Preparing transaction: done
Verifying transaction: done
Executing transaction: done
(geospatial) PS C:\Users\DELL> conda install -c conda-forge mamba
Collecting package metadata (current_repodata.json): done
Solving environment: done
## Package Plan ##
environment location: C:\ProgramData\Anaconda3\envs\geospatial
added / updated specs:
- mamba
The following NEW packages will be INSTALLED:
libarchive conda-forge/win-64::libarchive-3.5.2-hb45042f_1
libsolv pkgs/main/win-64::libsolv-0.7.20-h23ce68f_0
lzo conda-forge/win-64::lzo-2.10-he774522_1000
mamba conda-forge/win-64::mamba-0.15.3-py39h006a82b_0
reproc conda-forge/win-64::reproc-14.2.3-h8ffe710_0
reproc-cpp conda-forge/win-64::reproc-cpp-14.2.3-h0e60522_0
The following packages will be UPDATED:
ca-certificates pkgs/main::ca-certificates-2022.4.26-~ --> conda-forge::ca-certificates-2022.5.18.1-h5b45459_0
The following packages will be SUPERSEDED by a higher-priority channel:
certifi pkgs/main::certifi-2022.5.18.1-py39ha~ --> conda-forge::certifi-2022.5.18.1-py39hcbf5309_0
openssl pkgs/main::openssl-1.1.1o-h2bbff1b_0 --> conda-forge::openssl-1.1.1o-h8ffe710_0
Proceed ([y]/n)? y
Preparing transaction: done
Verifying transaction: done
Executing transaction: done
(geospatial) PS C:\Users\DELL> mamba
menuinst called from non-root env C:\ProgramData\Anaconda3\envs\geospatial
usage: mamba [-h] [-V] command ...
conda is a tool for managing and deploying applications, environments and packages.
Options:
positional arguments:
command
clean Remove unused packages and caches.
compare Compare packages between conda environments.
config Modify configuration values in .condarc. This is modeled after the git config command. Writes to the user .condarc file
(C:\Users\DELL\.condarc) by default.
create Create a new conda environment from a list of specified packages.
help Displays a list of available conda commands and their help strings.
info Display information about current conda install.
init Initialize conda for shell interaction. [Experimental]
install Installs a list of packages into a specified conda environment.
list List linked packages in a conda environment.
package Low-level conda package utility. (EXPERIMENTAL)
remove Remove a list of packages from a specified conda environment.
uninstall Alias for conda remove.
run Run an executable in a conda environment.
search Search for packages and display associated information. The input is a MatchSpec, a query language for conda packages. See
examples below.
update Updates conda packages to the latest compatible version.
upgrade Alias for conda update.
repoquery Query repositories using mamba.
optional arguments:
-h, --help Show this help message and exit.
-V, --version Show the conda version number and exit.
conda commands available from other packages:
env
(geospatial) PS C:\Users\DELL> mamba info
menuinst called from non-root env C:\ProgramData\Anaconda3\envs\geospatial
__ __ __ __
/ \ / \ / \ / \
/ \/ \/ \/ \
โโโโโโโโโโโโโโโ/ /โโ/ /โโ/ /โโ/ /โโโโโโโโโโโโโโโโโโโโโโโโ
/ / \ / \ / \ / \ \____
/ / \_/ \_/ \_/ \ o \__,
/ _/ \_____/ `
|/
โโโโ โโโโ โโโโโโ โโโโ โโโโโโโโโโโ โโโโโโ
โโโโโ โโโโโโโโโโโโโโโโโโ โโโโโโโโโโโโโโโโโโโโโ
โโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโ
โโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโ
โโโ โโโ โโโโโโ โโโโโโ โโโ โโโโโโโโโโโโโโ โโโ
โโโ โโโโโโ โโโโโโ โโโโโโโโโโ โโโ โโโ
mamba (0.15.3) supported by @QuantStack
GitHub: https://github.com/mamba-org/mamba
Twitter: https://twitter.com/QuantStack
โโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโ
active environment : base
active env location : C:\ProgramData\Anaconda3\envs\geospatial
shell level : 2
user config file : C:\Users\DELL\.condarc
populated config files : C:\Users\DELL\.condarc
conda version : 4.12.0
conda-build version : not installed
python version : 3.9.12.final.0
virtual packages : __win=0=0
__archspec=1=x86_64
base environment : C:\ProgramData\Anaconda3\envs\geospatial (writable)
conda av data dir : C:\ProgramData\Anaconda3\envs\geospatial\etc\conda
conda av metadata url : None
channel URLs : https://repo.anaconda.com/pkgs/main/win-64
https://repo.anaconda.com/pkgs/main/noarch
https://repo.anaconda.com/pkgs/r/win-64
https://repo.anaconda.com/pkgs/r/noarch
https://repo.anaconda.com/pkgs/msys2/win-64
https://repo.anaconda.com/pkgs/msys2/noarch
package cache : C:\ProgramData\Anaconda3\envs\geospatial\pkgs
C:\Users\DELL\.conda\pkgs
C:\Users\DELL\AppData\Local\conda\conda\pkgs
envs directories : C:\ProgramData\Anaconda3\envs\geospatial\envs
C:\Users\DELL\.conda\envs
C:\Users\DELL\AppData\Local\conda\conda\envs
platform : win-64
user-agent : conda/4.12.0 requests/2.24.0 CPython/3.9.12 Windows/10 Windows/10.0.19043
administrator : True
netrc file : None
offline mode : False
(geospatial) PS C:\Users\DELL>
Mamba update issue (?)
Trying to update mamba
I decide to try and update the mamba 0.15.3 to the latest version mamba 0.24.0 after it installed and worked:
- conda update mamba: sucessful (updated and removed few packages) :white_check_mark:
- testing mamba: still works but there was no actual update, still on previous version :o:
Update log
Click to expand update log
(geospatial) PS C:\Users\DELL> conda update mamba
Solving environment: done
## Package Plan ##
environment location: C:\ProgramData\Anaconda3\envs\geospatial
added / updated specs:
- mamba
The following packages will be REMOVED:
lzo-2.10-he774522_1000
The following packages will be UPDATED:
reproc conda-forge::reproc-14.2.3-h8ffe710_0 --> pkgs/main::reproc-14.2.4-hd77b12b_1
reproc-cpp conda-forge::reproc-cpp-14.2.3-h0e605~ --> pkgs/main::reproc-cpp-14.2.4-hd77b12b_1
The following packages will be SUPERSEDED by a higher-priority channel:
ca-certificates conda-forge::ca-certificates-2022.5.1~ --> pkgs/main::ca-certificates-2022.4.26-haa95532_0
certifi conda-forge::certifi-2022.5.18.1-py39~ --> pkgs/main::certifi-2022.5.18.1-py39haa95532_0
libarchive conda-forge::libarchive-3.5.2-hb45042~ --> pkgs/main::libarchive-3.5.2-h214662b_0
openssl conda-forge::openssl-1.1.1o-h8ffe710_0 --> pkgs/main::openssl-1.1.1o-h2bbff1b_0
Proceed ([y]/n)? y
Preparing transaction: done
Verifying transaction: done
Executing transaction: done
(geospatial) PS C:\Users\DELL> mamba info
menuinst called from non-root env C:\ProgramData\Anaconda3\envs\geospatial
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/ / \ / \ / \ / \ \____
/ / \_/ \_/ \_/ \ o \__,
/ _/ \_____/ `
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mamba (0.15.3) supported by @QuantStack
GitHub: https://github.com/mamba-org/mamba
Twitter: https://twitter.com/QuantStack
โโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโโ
active environment : base
active env location : C:\ProgramData\Anaconda3\envs\geospatial
shell level : 2
user config file : C:\Users\DELL\.condarc
populated config files : C:\Users\DELL\.condarc
conda version : 4.12.0
conda-build version : not installed
python version : 3.9.12.final.0
virtual packages : __win=0=0
__archspec=1=x86_64
base environment : C:\ProgramData\Anaconda3\envs\geospatial (writable)
conda av data dir : C:\ProgramData\Anaconda3\envs\geospatial\etc\conda
conda av metadata url : None
channel URLs : https://repo.anaconda.com/pkgs/main/win-64
https://repo.anaconda.com/pkgs/main/noarch
https://repo.anaconda.com/pkgs/r/win-64
https://repo.anaconda.com/pkgs/r/noarch
https://repo.anaconda.com/pkgs/msys2/win-64
https://repo.anaconda.com/pkgs/msys2/noarch
package cache : C:\ProgramData\Anaconda3\envs\geospatial\pkgs
C:\Users\DELL\.conda\pkgs
C:\Users\DELL\AppData\Local\conda\conda\pkgs
envs directories : C:\ProgramData\Anaconda3\envs\geospatial\envs
C:\Users\DELL\.conda\envs
C:\Users\DELL\AppData\Local\conda\conda\envs
platform : win-64
user-agent : conda/4.12.0 requests/2.24.0 CPython/3.9.12 Windows/10 Windows/10.0.19043
administrator : True
netrc file : None
offline mode : False
(geospatial) PS C:\Users\DELL>
I faced the same issue when I tried to build a conda package using "boa"
The command was: conda mambabuild ./conda.recipe/ --output-folder /tmp/__localbuild__/conda/ --no-test -q
The error:
Traceback (most recent call last):
File "/tmp/conda_envs/py37-conda-build/bin/conda-mambabuild", line 6, in <module>
from boa.cli.mambabuild import main
File "/tmp/conda_envs/py37-conda-build/lib/python3.7/site-packages/boa/cli/mambabuild.py", line 21, in <module>
from boa.core.solver import MambaSolver
File "/tmp/conda_envs/py37-conda-build/lib/python3.7/site-packages/boa/core/solver.py", line 21, in <module>
import libmambapy
File "/tmp/conda_envs/py37-conda-build/lib/python3.7/site-packages/libmambapy/__init__.py", line 7, in <module>
raise e
File "/tmp/conda_envs/py37-conda-build/lib/python3.7/site-packages/libmambapy/__init__.py", line 4, in <module>
from libmambapy.bindings import * # noqa: F401,F403
ImportError: libarchive.so.13: cannot open shared object file: No such file or directory
I compare a healthy environment with the unhealthy environment and there are 3 diffs: healthy vs unhealthy libarchive 3.5.2 hb890918_2 vs libarchive 3.5.2 h5de8990_0 lzo 2.10 vs None tk 8.6.11 h1ccaba5_1 vs tk 8.6.12 h1ccaba5_0
I suspect that somehow the libarchive was corrupted by someone...
As a workaround, the following command solved the issue:
mamba install libarchive=3.5.2=hb890918_2 -y
I also experienced the same ImportError: libarchive.so.13: cannot open shared object file: No such file or directory problem.
libarchive from defaults channel seems broken but the one from conda-forge is working.
So this install line resulted in a broken mamba for me: conda install mamba -n base -c defaults -c conda-forge.
But this install line worked (switched channels priority order): conda install mamba -n base -c conda-forge -c defaults.
The side-effect is the entire base env is now updated to conda-forge version. Hope there is no negative effect.
I am currently seeing this issue with both the conda-forge and defaults channel. Running mamba install libarchive=3.5.2=hb890918_2 -y also results in the same error for me. Anyone got any suggestions?
Had the same problem, which I think came from an inconsistent version of libmambapy. Remove it, if you do not explicitly need it. Worked fine for me.
To be more exact: I had an older version (0.24) in the current environment (relict from some test some time ago), while the base env was already at 0.27.
ImportError: DLL load failed while importing mamba_api: The specified module could not be found.
tried uninstalling and installing
I met the same error:
> mamba
Traceback (most recent call last):
File "D:\miniforge3\Scripts\mamba-script.py", line 6, in <module>
from mamba.mamba import main
File "D:\miniforge3\lib\site-packages\mamba\mamba.py", line 49, in <module>
import libmambapy as api
File "D:\miniforge3\lib\site-packages\libmambapy\__init__.py", line 7, in <module>
raise e
File "D:\miniforge3\lib\site-packages\libmambapy\__init__.py", line 4, in <module>
from libmambapy.bindings import * # noqa: F401,F403
ImportError: DLL load failed while importing bindings: ๆพไธๅฐๆๅฎ็ๆจกๅใ
> conda list mamba
# packages in environment at D:\miniforge3:
#
# Name Version Build Channel
libmamba 1.1.0 ha1e45d8_2 conda-forge
libmambapy 1.1.0 py310h954024b_2 conda-forge
mamba 1.1.0 py310h9376f3e_2 conda-forge
I use Dependencies to look at D:\miniforge3\Lib\site-packages\libmambapy\bindings.cp310-win_amd64.pyd and there is a missing DLL ext-ms-win-oobe-query-l1-1-0.dll
While not a solution to this problem, maybe a cure: Try using micromamba.
Hi everyone, please stop adding new comments that donโt provide any new insights other than youโre also affected. Comments will notify everyone in this thread. Please use emoji reactions instead.
I just installed mambaforge (comes with mamba 1.1.0) on a Windows 10 machine. Everything was going fine installing the packages I need until I used mamba to install the vtk library. Then I got this exact error. With mamba broken and no conda to back it up, I had to uninstall.
I don't know what about vtk or its dependencies could have broken mamba, but hopefully this will provide a clue of some sort?
On my second try with mambaforge, the first thing I did right after installing the Windows executable was to update mamba to 1.3.1. The second thing I did was try to install vtk (mamba install vtk). That breaks it.
I recognized that I can repare a broken env by any existing env
conda activte ENV_IN_GOOD_STATE
c:/Users/r.bauer/Miniconda3/envs/mssenv/Scripts/conda.exe install -p C:\Users\r.bauer\Miniconda3\envs\ENV_TO_REPAIR python conda==22.9.0
Note that Conda should not be installed to environments other than base though. See https://mamba.readthedocs.io/en/latest/user_guide/troubleshooting.html#mamba-should-be-installed-to-the-base-environment
I had the same issue with a self-hosted CI using setup-miniconda with mamba. The github runner is running in a container defined by this dockerfile: https://github.com/osl-incubator/github-actions-self-hosted-runner/blob/main/Dockerfile
for the record, it is the setup-miniconda configuration I am using:
- uses: conda-incubator/setup-miniconda@v2
with:
miniconda-version: "latest"
mamba-version: "1.*"
environment-file: conda/release.yaml
channels: nodefaults,conda-forge
channel-priority: true
activate-environment: release
miniforge-variant: Mambaforge
and this is the log from the CI runner: https://pastebin.com/9kzyBsC8
maybe the problem is in the setup-miniconda side .. not sure .. but I am sharing it here in the case the logs could help in the discussion.
Installing mamba 1.4.6, 1.4.7 or 1.4.9 directly triggered the same libarchive.so.13 error for me.
However, somehow for me it seems to be working after installing mamba 1.4.5, and then updating to 1.4.9.
conda install 'mamba<=1.4.5' -n base -c conda-forge
conda update mamba -n base -c conda-forge
# At first: conda-forge/linux-64::mamba-1.4.5-py311h3072747_0
# Then: 1.4.5-py311h3072747_0 --> 1.4.9-py311h3072747_0
When you have a recent conda by anaconda, then you have the libmamba solver builtin. https://www.anaconda.com/blog/a-faster-conda-for-a-growing-community
If you don't use anaconda's default channel but have conda-forge your first or only channel have a look on mambaforge.