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datasets format issues

Open fighting-boy1 opened this issue 5 months ago • 0 comments

Hi. Thanks for your great work! May I ask you a question?

run: ~/MAPS/scripts/CellSighter/cHL2_MIBI_training.py error: As shown in the following picture. **reason:**Data format problem? **question:**Take cHL2_MIBI data as an example, according to the data download address given in the article, the data format is this: annotation_csv; raw_image; segmentation ~, but running CellSighter/cHL2_MIBI_training.py requires the data format to be this,Under the CellTypes directory:data; cells; cells2labels, how to solve or convert it?

thank you very much for your outstanding contribution!

1

fighting-boy1 avatar Sep 21 '24 08:09 fighting-boy1