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Visualization Disturbing Original H&E

Open matthew-lee1 opened this issue 1 year ago • 0 comments

Hello I followed the command in the attention visualization .ipynb for 4096 individual (not concatenated). I am noticing that on the raw image there are some discolorations but it is not across the entire image.

Here I've set alpha=0, therefore the attention map should be transparent, but we still see some green. I am wondering what this is and if it a pixel level attention? Not sure if it is noteworthy but I am running this on a 40X magnification level image.

Screenshot 2023-11-14 at 1 26 45 PM

Thanks for any insights!

matthew-lee1 avatar Nov 14 '23 19:11 matthew-lee1