marmaduke woodman
marmaduke woodman
#### Describe the new feature or enhancement A Pythonic wrapper for DCM was created https://github.com/roschkoenig/Pythonic-DCM, we can consider wrapping it or generating TVB model code for interfacing with the algorithms...
#### Describe the new feature or enhancement (migration from Jira task https://req.thevirtualbrain.org/browse/TVB-2001) We don't currently have any population density models, but Nicholas Cain at the Allen Institute is developing DiPDE...
#### Describe the new feature or enhancement An implicit theta (like Heun but corrector stage is implicit/backwards Euler) should be implemented and tested with respect to history implementation. An implicit...
#### Describe the new feature or enhancement Large-scale connectivity currently only applies once per time step even in case of Heun or RK4 methods. This is done out of efficiency...
#### Describe the bug The surface history update in TVB is too slow. #### Additional information A draft reimplementation is over #393 but needs further work prior to merge.
#### Describe the new feature or enhancement A single network model should support multiple models on different nodes. #### Describe your proposed implementation ```python class MultiModels: models = List(of=Model, required=True)...
#### Describe the bug Models can specify incorrect `_nvar`. #### Steps to reproduce ```python class Model: _nvar = 3 state_variables = 'r', 'V' m = Model() m.nvar() != len(m.state_variables) ```...
Several open issues with the library on Jira could be migrated here: - [x] [TVB-2842](https://req.thevirtualbrain.org/browse/TVB-2842) - refactoring numerics in simulator to a reference backend - [x] [TVB-2890](https://req.thevirtualbrain.org/browse/TVB-2890) - gdist numpy...
#### Describe the new feature or enhancement To avoid ad-hoc arrays for configuration of parameter sweeps or priors over parameters (for inference), a new datatype is required which can express...