biopieces issues

Missing dependencies and wrong python library

2

Hi I am building a container for biopieces for our cluster and found those issues (on the master branch) - JSON::XS is required by some tools but not listed in...

smoretti

Problems waiting to be solved

3

Dear Sir, After the installation, I tried to use the script, but some error was produced as follow. Can you help to figure it out? [root@student bin]# **split_seq -h** Error....

Lily-WL

POSIX::islower() no longer exists.

1

So I put a doofy little if() in Seq.pm

abelew

Hi I was wondering if I would be able to use get_genome_phastcons for the Drosophila dm6 genome? I think it should work with this - http://hgdownload-test.cse.ucsc.edu/goldenPath/dm6/phastCons27way/? Thank you so much!

varsh1090