Cleanup/consistency list

[m-clark]

Bigger changes

• [ ] All chapters should have key ideas, why this matters, good to know, where to go, wrapping up sections (and exercises if appropriate); reference per chapter to be determined (#17)
• [ ] All chapters/sections (at least level 2) need to be linkable and linked throughout the text
• [ ] Add content to preface/acknowledgments/misc models
• [x] #19
• [ ] Spelling/typo checks

Data

• [ ] Data needs to be linked. Possibly early on like even in preface.
• [ ] There should be only one version of a single data source being used (e.g. not one with and without some features)

Potential Content Trimming

• [ ] Merge overlapping content
  • [x] LM and model exploration chapter
  • [ ] Data, and ML other models chap, and misc models chap
• [ ] ML concepts gets pretty deep, could trim a lot there
• [x] Could remove what amounts to a demo chapter in the intro
• [ ] Could remove some appendix content (matrix, nix simulation, bayes)
• [x] Drop some deeper code examples (e.g. estimation beyond the estimation chapter may need to be nixed for length. Just comment out.
• [X] LM Part needs consistency update

Code

• [ ] code needs to be cleaned/made consistent between SB and MC
  • R:
  • [ ] No <- assignment for R code
  • [ ] 4 space indent?
  • Py:
  • [ ] uglify to Pep standards
  • [ ] Other?
  • General:
  • [ ] No more than 80 char for pdf
  • [ ] !! Make sure the printed code runs as is !!

Tables & Figures

• [ ] Make sure all figures and tables are linkable/cross-referenceable
• [ ] Make sure no labels have underscores (latex can't handle it)
• [ ] Make sure no gt tables use color (latex can't handle it)

Other that needs to be done

• [ ] Add simulation demo/discussion if space permits
• [ ] Chapter title/section casing (use css if possible)
• [ ] Dataset descriptions
• [ ] bold should be key words, italics just for emphasis
• [ ] Save out figures as separate files if not already. Preferably svg.
• [ ] Move programming discussion in ML to a general one in Part 3 or appendix. Trim discussion in intro?
• [x] https://github.com/quarto-dev/quarto-cli/issues/7856
• [ ] Fix missing crossref

Lesser issues

• [ ] Want to remove chapter specific folders. keep everything in just data, img.
• [ ] All the graphical models need separate dot files and looks the same
• [ ] All chunks should be named