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lmcinnes
RuntimeError: cannot cache function 'sparse_correct_alternative_cosine': no locator available for file '/Users/dbl/anaconda/envs/lda2vec/lib/python3.6/site-packages/pynndescent-0.4.8-py3.6.egg/pynndescent/sparse.py'
I am running Anaconda Python 3.6.11
I am getting this error running the example program mnist_torus_sphere_example.py: E.g.
$ python mnist_torus_sphere_example.py
Traceback (most recent call last):
File "mnist_torus_sphere_example.py", line 10, in <module>
import umap
File "/Users/davidlaxer/anaconda/envs/lda2vec/lib/python3.6/site-packages/umap_learn-0.4.6-py3.6.egg/umap/__init__.py", line 1, in <module>
from .umap_ import UMAP
File "/Users/davidlaxer/anaconda/envs/lda2vec/lib/python3.6/site-packages/umap_learn-0.4.6-py3.6.egg/umap/umap_.py", line 62, in <module>
from pynndescent import NNDescent
File "<frozen importlib._bootstrap>", line 971, in _find_and_load
File "<frozen importlib._bootstrap>", line 955, in _find_and_load_unlocked
File "<frozen importlib._bootstrap>", line 656, in _load_unlocked
File "<frozen importlib._bootstrap>", line 626, in _load_backward_compatible
File "/Users/davidlaxer/anaconda/envs/lda2vec/lib/python3.6/site-packages/pynndescent-0.4.8-py3.6.egg/pynndescent/__init__.py", line 3, in <module>
import util
File "<frozen importlib._bootstrap>", line 971, in _find_and_load
File "<frozen importlib._bootstrap>", line 955, in _find_and_load_unlocked
File "<frozen importlib._bootstrap>", line 656, in _load_unlocked
File "<frozen importlib._bootstrap>", line 626, in _load_backward_compatible
File "/Users/davidlaxer/anaconda/envs/lda2vec/lib/python3.6/site-packages/pynndescent-0.4.8-py3.6.egg/pynndescent/pynndescent_.py", line 15, in <module>
File "<frozen importlib._bootstrap>", line 971, in _find_and_load
File "<frozen importlib._bootstrap>", line 955, in _find_and_load_unlocked
File "<frozen importlib._bootstrap>", line 656, in _load_unlocked
File "<frozen importlib._bootstrap>", line 626, in _load_backward_compatible
File "/Users/davidlaxer/anaconda/envs/lda2vec/lib/python3.6/site-packages/pynndescent-0.4.8-py3.6.egg/pynndescent/sparse.py", line 445, in <module>
File "/Users/davidlaxer/anaconda/envs/lda2vec/lib/python3.6/site-packages/numba/np/ufunc/decorators.py", line 118, in wrap
vec = Vectorize(func, **kws)
File "/Users/davidlaxer/anaconda/envs/lda2vec/lib/python3.6/site-packages/numba/np/ufunc/decorators.py", line 38, in __new__
return imp(func, identity=identity, cache=cache, targetoptions=kws)
File "/Users/davidlaxer/anaconda/envs/lda2vec/lib/python3.6/site-packages/numba/np/ufunc/dufunc.py", line 83, in __init__
**targetoptions)(py_func)
File "/Users/davidlaxer/anaconda/envs/lda2vec/lib/python3.6/site-packages/numba/core/decorators.py", line 211, in wrapper
disp.enable_caching()
File "/Users/davidlaxer/anaconda/envs/lda2vec/lib/python3.6/site-packages/numba/np/ufunc/ufuncbuilder.py", line 75, in enable_caching
self.cache = FunctionCache(self.py_func)
File "/Users/davidlaxer/anaconda/envs/lda2vec/lib/python3.6/site-packages/numba/core/caching.py", line 620, in __init__
self._impl = self._impl_class(py_func)
File "/Users/davidlaxer/anaconda/envs/lda2vec/lib/python3.6/site-packages/numba/core/caching.py", line 356, in __init__
"for file %r" % (qualname, source_path))
RuntimeError: cannot cache function 'sparse_correct_alternative_cosine': no locator available for file '/Users/davidlaxer/anaconda/envs/lda2vec/lib/python3.6/site-packages/pynndescent-0.4.8-py3.6.egg/pynndescent/sparse.py'
and
$ ipython
Python 3.6.11 | packaged by conda-forge | (default, Aug 5 2020, 20:19:23)
Type 'copyright', 'credits' or 'license' for more information
IPython 7.16.1 -- An enhanced Interactive Python. Type '?' for help.
In [1]: import umap
---------------------------------------------------------------------------
RuntimeError Traceback (most recent call last)
<ipython-input-1-623e299b05c0> in <module>
----> 1 import umap
~/anaconda/envs/lda2vec/lib/python3.6/site-packages/umap_learn-0.4.6-py3.6.egg/umap/__init__.py in <module>
----> 1 from .umap_ import UMAP
2
3 # Workaround: https://github.com/numba/numba/issues/3341
4 import numba
5
~/anaconda/envs/lda2vec/lib/python3.6/site-packages/umap_learn-0.4.6-py3.6.egg/umap/umap_.py in <module>
60 try:
61 # Use pynndescent, if installed (python 3 only)
---> 62 from pynndescent import NNDescent
63 from pynndescent.distances import named_distances as pynn_named_distances
64 from pynndescent.sparse import sparse_named_distances as pynn_sparse_named_distances
~/anaconda/envs/lda2vec/lib/python3.6/importlib/_bootstrap.py in _find_and_load(name, import_)
~/anaconda/envs/lda2vec/lib/python3.6/importlib/_bootstrap.py in _find_and_load_unlocked(name, import_)
~/anaconda/envs/lda2vec/lib/python3.6/importlib/_bootstrap.py in _load_unlocked(spec)
~/anaconda/envs/lda2vec/lib/python3.6/importlib/_bootstrap.py in _load_backward_compatible(spec)
~/anaconda/envs/lda2vec/lib/python3.6/site-packages/pynndescent-0.4.8-py3.6.egg/pynndescent/__init__.py in <module>
1 import pkg_resources
2 import numba
----> 3 from .pynndescent_ import NNDescent, PyNNDescentTransformer
4
5 # Workaround: https://github.com/numba/numba/issues/3341
~/anaconda/envs/lda2vec/lib/python3.6/importlib/_bootstrap.py in _find_and_load(name, import_)
~/anaconda/envs/lda2vec/lib/python3.6/importlib/_bootstrap.py in _find_and_load_unlocked(name, import_)
~/anaconda/envs/lda2vec/lib/python3.6/importlib/_bootstrap.py in _load_unlocked(spec)
~/anaconda/envs/lda2vec/lib/python3.6/importlib/_bootstrap.py in _load_backward_compatible(spec)
~/anaconda/envs/lda2vec/lib/python3.6/site-packages/pynndescent-0.4.8-py3.6.egg/pynndescent/pynndescent_.py in <module>
13 import heapq
14
---> 15 import pynndescent.sparse as sparse
16 import pynndescent.sparse_nndescent as sparse_nnd
17 import pynndescent.distances as dist
~/anaconda/envs/lda2vec/lib/python3.6/importlib/_bootstrap.py in _find_and_load(name, import_)
~/anaconda/envs/lda2vec/lib/python3.6/importlib/_bootstrap.py in _find_and_load_unlocked(name, import_)
~/anaconda/envs/lda2vec/lib/python3.6/importlib/_bootstrap.py in _load_unlocked(spec)
~/anaconda/envs/lda2vec/lib/python3.6/importlib/_bootstrap.py in _load_backward_compatible(spec)
~/anaconda/envs/lda2vec/lib/python3.6/site-packages/pynndescent-0.4.8-py3.6.egg/pynndescent/sparse.py in <module>
443
444
--> 445 @numba.vectorize(fastmath=True, cache=True)
446 def sparse_correct_alternative_cosine(d):
447 if isclose(0.0, abs(d), atol=1e-7) or d < 0.0:
~/anaconda/envs/lda2vec/lib/python3.6/site-packages/numba/np/ufunc/decorators.py in wrap(func)
116
117 def wrap(func):
--> 118 vec = Vectorize(func, **kws)
119 for sig in ftylist:
120 vec.add(sig)
~/anaconda/envs/lda2vec/lib/python3.6/site-packages/numba/np/ufunc/decorators.py in __new__(cls, func, **kws)
36 cache = cls.get_cache(kws)
37 imp = cls.get_target_implementation(kws)
---> 38 return imp(func, identity=identity, cache=cache, targetoptions=kws)
39
40
~/anaconda/envs/lda2vec/lib/python3.6/site-packages/numba/np/ufunc/dufunc.py in __init__(self, py_func, identity, cache, targetoptions)
81 dispatcher = jit(_target='npyufunc',
82 cache=cache,
---> 83 **targetoptions)(py_func)
84 self._initialize(dispatcher, identity)
85
~/anaconda/envs/lda2vec/lib/python3.6/site-packages/numba/core/decorators.py in wrapper(func)
209 **dispatcher_args)
210 if cache:
--> 211 disp.enable_caching()
212 if sigs is not None:
213 # Register the Dispatcher to the type inference mechanism,
~/anaconda/envs/lda2vec/lib/python3.6/site-packages/numba/np/ufunc/ufuncbuilder.py in enable_caching(self)
73
74 def enable_caching(self):
---> 75 self.cache = FunctionCache(self.py_func)
76
77 def compile(self, sig, locals={}, **targetoptions):
~/anaconda/envs/lda2vec/lib/python3.6/site-packages/numba/core/caching.py in __init__(self, py_func)
618 self._name = repr(py_func)
619 self._py_func = py_func
--> 620 self._impl = self._impl_class(py_func)
621 self._cache_path = self._impl.locator.get_cache_path()
622 # This may be a bit strict but avoids us maintaining a magic number
~/anaconda/envs/lda2vec/lib/python3.6/site-packages/numba/core/caching.py in __init__(self, py_func)
354 else:
355 raise RuntimeError("cannot cache function %r: no locator available "
--> 356 "for file %r" % (qualname, source_path))
357 self._locator = locator
358 # Use filename base name as module name to avoid conflict between
RuntimeError: cannot cache function 'sparse_correct_alternative_cosine': no locator available for file '/Users/davidlaxer/anaconda/envs/lda2vec/lib/python3.6/site-packages/pynndescent-0.4.8-py3.6.egg/pynndescent/sparse.py'
I would suggest trying to upgrade numba. I admit that I am not entirely sure what has gone astray here.
$ conda install -c conda-forge umap-learn
Collecting package metadata (current_repodata.json): done
Solving environment: done
## Package Plan ##
environment location: /Users/davidlaxer/anaconda/envs/lda2vec
added / updated specs:
- umap-learn
The following packages will be downloaded:
package | build
---------------------------|-----------------
umap-learn-0.4.6 | py36h9f0ad1d_0 110 KB conda-forge
------------------------------------------------------------
Total: 110 KB
The following NEW packages will be INSTALLED:
scikit-learn conda-forge/osx-64::scikit-learn-0.23.2-py36h637a150_0
threadpoolctl conda-forge/noarch::threadpoolctl-2.1.0-pyh5ca1d4c_0
umap-learn conda-forge/osx-64::umap-learn-0.4.6-py36h9f0ad1d_0
Proceed ([y]/n)? y
Downloading and Extracting Packages
umap-learn-0.4.6 | 110 KB | ##################################### | 100%
Preparing transaction: done
Verifying transaction: done
Executing transaction: done
(lda2vec) MacBook-Pro:umap davidlaxer$ cd examples
(lda2vec) MacBook-Pro:examples davidlaxer$ python mnist_torus_sphere_example.py
Traceback (most recent call last):
File "mnist_torus_sphere_example.py", line 10, in <module>
import umap
File "/Users/davidlaxer/anaconda/envs/lda2vec/lib/python3.6/site-packages/umap/__init__.py", line 1, in <module>
from .umap_ import UMAP
File "/Users/davidlaxer/anaconda/envs/lda2vec/lib/python3.6/site-packages/umap/umap_.py", line 62, in <module>
from pynndescent import NNDescent
File "<frozen importlib._bootstrap>", line 971, in _find_and_load
File "<frozen importlib._bootstrap>", line 955, in _find_and_load_unlocked
File "<frozen importlib._bootstrap>", line 656, in _load_unlocked
File "<frozen importlib._bootstrap>", line 626, in _load_backward_compatible
File "/Users/davidlaxer/anaconda/envs/lda2vec/lib/python3.6/site-packages/pynndescent-0.4.8-py3.6.egg/pynndescent/__init__.py", line 3, in <module>
import util
File "<frozen importlib._bootstrap>", line 971, in _find_and_load
File "<frozen importlib._bootstrap>", line 955, in _find_and_load_unlocked
File "<frozen importlib._bootstrap>", line 656, in _load_unlocked
File "<frozen importlib._bootstrap>", line 626, in _load_backward_compatible
File "/Users/davidlaxer/anaconda/envs/lda2vec/lib/python3.6/site-packages/pynndescent-0.4.8-py3.6.egg/pynndescent/pynndescent_.py", line 15, in <module>
File "<frozen importlib._bootstrap>", line 971, in _find_and_load
File "<frozen importlib._bootstrap>", line 955, in _find_and_load_unlocked
File "<frozen importlib._bootstrap>", line 656, in _load_unlocked
File "<frozen importlib._bootstrap>", line 626, in _load_backward_compatible
File "/Users/davidlaxer/anaconda/envs/lda2vec/lib/python3.6/site-packages/pynndescent-0.4.8-py3.6.egg/pynndescent/sparse.py", line 445, in <module>
File "/Users/davidlaxer/anaconda/envs/lda2vec/lib/python3.6/site-packages/numba/np/ufunc/decorators.py", line 118, in wrap
vec = Vectorize(func, **kws)
File "/Users/davidlaxer/anaconda/envs/lda2vec/lib/python3.6/site-packages/numba/np/ufunc/decorators.py", line 38, in __new__
return imp(func, identity=identity, cache=cache, targetoptions=kws)
File "/Users/davidlaxer/anaconda/envs/lda2vec/lib/python3.6/site-packages/numba/np/ufunc/dufunc.py", line 83, in __init__
**targetoptions)(py_func)
File "/Users/davidlaxer/anaconda/envs/lda2vec/lib/python3.6/site-packages/numba/core/decorators.py", line 211, in wrapper
disp.enable_caching()
File "/Users/davidlaxer/anaconda/envs/lda2vec/lib/python3.6/site-packages/numba/np/ufunc/ufuncbuilder.py", line 75, in enable_caching
self.cache = FunctionCache(self.py_func)
File "/Users/davidlaxer/anaconda/envs/lda2vec/lib/python3.6/site-packages/numba/core/caching.py", line 620, in __init__
self._impl = self._impl_class(py_func)
File "/Users/davidlaxer/anaconda/envs/lda2vec/lib/python3.6/site-packages/numba/core/caching.py", line 356, in __init__
"for file %r" % (qualname, source_path))
RuntimeError: cannot cache function 'sparse_correct_alternative_cosine': no locator available for file '/Users/davidlaxer/anaconda/envs/lda2vec/lib/python3.6/site-packages/pynndescent-0.4.8-py3.6.egg/pynndescent/sparse.py'
(lda2vec) MacBook-Pro:examples davidlaxer$ conda list numba
# packages in environment at /Users/davidlaxer/anaconda/envs/lda2vec:
#
# Name Version Build Channel
numba 0.51.1 py36h72eec15_0 conda-forge
(lda2vec) MacBook-Pro:examples davidlaxer$ conda upgrade numba
Collecting package metadata (current_repodata.json): done
Solving environment: done
## Package Plan ##
environment location: /Users/davidlaxer/anaconda/envs/lda2vec
added / updated specs:
- numba
The following packages will be downloaded:
package | build
---------------------------|-----------------
prompt-toolkit-3.0.7 | py_0 235 KB conda-forge
prompt_toolkit-3.0.7 | 0 4 KB conda-forge
statsmodels-0.12.0 | py36h9de38fb_0 10.6 MB conda-forge
------------------------------------------------------------
Total: 10.8 MB
The following NEW packages will be INSTALLED:
libgfortran4 conda-forge/osx-64::libgfortran4-7.5.0-h1565451_3
The following packages will be UPDATED:
libgfortran 4.0.0-2 --> 4.0.0-3
prompt-toolkit 3.0.6-py_0 --> 3.0.7-py_0
prompt_toolkit 3.0.6-0 --> 3.0.7-0
statsmodels 0.11.1-py36h37b9a7d_2 --> 0.12.0-py36h9de38fb_0
zlib 1.2.11-1007 --> 1.2.11-h7795811_1009
Proceed ([y]/n)? y
Downloading and Extracting Packages
prompt-toolkit-3.0.7 | 235 KB | ##################################### | 100%
prompt_toolkit-3.0.7 | 4 KB | ##################################### | 100%
statsmodels-0.12.0 | 10.6 MB | ##################################### | 100%
Preparing transaction: done
Verifying transaction: done
Executing transaction: done
(lda2vec) MacBook-Pro:examples davidlaxer$ conda list numba
# packages in environment at /Users/davidlaxer/anaconda/envs/lda2vec:
#
# Name Version Build Channel
numba 0.51.1 py36h72eec15_0 conda-forge
(lda2vec) MacBook-Pro:examples davidlaxer$ python mnist_torus_sphere_example.py
Traceback (most recent call last):
File "mnist_torus_sphere_example.py", line 10, in <module>
import umap
File "/Users/davidlaxer/anaconda/envs/lda2vec/lib/python3.6/site-packages/umap/__init__.py", line 1, in <module>
from .umap_ import UMAP
File "/Users/davidlaxer/anaconda/envs/lda2vec/lib/python3.6/site-packages/umap/umap_.py", line 62, in <module>
from pynndescent import NNDescent
File "<frozen importlib._bootstrap>", line 971, in _find_and_load
File "<frozen importlib._bootstrap>", line 955, in _find_and_load_unlocked
File "<frozen importlib._bootstrap>", line 656, in _load_unlocked
File "<frozen importlib._bootstrap>", line 626, in _load_backward_compatible
File "/Users/davidlaxer/anaconda/envs/lda2vec/lib/python3.6/site-packages/pynndescent-0.4.8-py3.6.egg/pynndescent/__init__.py", line 3, in <module>
import util
File "<frozen importlib._bootstrap>", line 971, in _find_and_load
File "<frozen importlib._bootstrap>", line 955, in _find_and_load_unlocked
File "<frozen importlib._bootstrap>", line 656, in _load_unlocked
File "<frozen importlib._bootstrap>", line 626, in _load_backward_compatible
File "/Users/davidlaxer/anaconda/envs/lda2vec/lib/python3.6/site-packages/pynndescent-0.4.8-py3.6.egg/pynndescent/pynndescent_.py", line 15, in <module>
File "<frozen importlib._bootstrap>", line 971, in _find_and_load
File "<frozen importlib._bootstrap>", line 955, in _find_and_load_unlocked
File "<frozen importlib._bootstrap>", line 656, in _load_unlocked
File "<frozen importlib._bootstrap>", line 626, in _load_backward_compatible
File "/Users/davidlaxer/anaconda/envs/lda2vec/lib/python3.6/site-packages/pynndescent-0.4.8-py3.6.egg/pynndescent/sparse.py", line 445, in <module>
File "/Users/davidlaxer/anaconda/envs/lda2vec/lib/python3.6/site-packages/numba/np/ufunc/decorators.py", line 118, in wrap
vec = Vectorize(func, **kws)
File "/Users/davidlaxer/anaconda/envs/lda2vec/lib/python3.6/site-packages/numba/np/ufunc/decorators.py", line 38, in __new__
return imp(func, identity=identity, cache=cache, targetoptions=kws)
File "/Users/davidlaxer/anaconda/envs/lda2vec/lib/python3.6/site-packages/numba/np/ufunc/dufunc.py", line 83, in __init__
**targetoptions)(py_func)
File "/Users/davidlaxer/anaconda/envs/lda2vec/lib/python3.6/site-packages/numba/core/decorators.py", line 211, in wrapper
disp.enable_caching()
File "/Users/davidlaxer/anaconda/envs/lda2vec/lib/python3.6/site-packages/numba/np/ufunc/ufuncbuilder.py", line 75, in enable_caching
self.cache = FunctionCache(self.py_func)
File "/Users/davidlaxer/anaconda/envs/lda2vec/lib/python3.6/site-packages/numba/core/caching.py", line 620, in __init__
self._impl = self._impl_class(py_func)
File "/Users/davidlaxer/anaconda/envs/lda2vec/lib/python3.6/site-packages/numba/core/caching.py", line 356, in __init__
"for file %r" % (qualname, source_path))
RuntimeError: cannot cache function 'sparse_correct_alternative_cosine': no locator available for file '/Users/davidlaxer/anaconda/envs/lda2vec/lib/python3.6/site-packages/pynndescent-0.4.8-py3.6.egg/pynndescent/sparse.py'
(lda2vec) MacBook-Pro:examples davidlaxer$
It might be down to the zipsafe issue in pynndescent. That means you can either re-install pynndescent (by getting a copy from the repository and setting the zipsafe=False argument in the setup.py and installing), or simply remove the cache=True arguments on any functions. The latter is definitely harder, but will operate in place on your environment if you wish.
Edit: I have updated the dev branch of pynndescent to fix this, and hopefully I will be putting out an RC release with this fix in it soon.
Setting zipsafe=False, resolved the error. Any ideas on this exception? (Open a new issue?)
$ python mnist_torus_sphere_example.py
UMAP(n_neighbors=10, random_state=42, verbose=True)
Construct fuzzy simplicial set
Tue Sep 1 10:44:25 2020 Finding Nearest Neighbors
Tue Sep 1 10:44:30 2020 Finished Nearest Neighbor Search
Tue Sep 1 10:44:35 2020 Construct embedding
completed 0 / 500 epochs
completed 50 / 500 epochs
completed 100 / 500 epochs
completed 150 / 500 epochs
completed 200 / 500 epochs
completed 250 / 500 epochs
completed 300 / 500 epochs
completed 350 / 500 epochs
completed 400 / 500 epochs
completed 450 / 500 epochs
Tue Sep 1 10:44:42 2020 Finished embedding
2020-09-01 10:44:42.967 python[63078:24525645] -[QNSApplication macMinorVersion]: unrecognized selector sent to instance 0x7f8c3462bb10
2020-09-01 10:44:42.988 python[63078:24525645] An uncaught exception was raised
2020-09-01 10:44:42.989 python[63078:24525645] -[QNSApplication macMinorVersion]: unrecognized selector sent to instance 0x7f8c3462bb10
2020-09-01 10:44:42.989 python[63078:24525645] (
0 CoreFoundation 0x00007fff89e87452 __exceptionPreprocess + 178
1 libobjc.A.dylib 0x00007fff94fbe73c objc_exception_throw + 48
2 CoreFoundation 0x00007fff89ef118d -[NSObject(NSObject) doesNotRecognizeSelector:] + 205
3 CoreFoundation 0x00007fff89df74c1 ___forwarding___ + 1009
4 CoreFoundation 0x00007fff89df7048 _CF_forwarding_prep_0 + 120
5 libtk8.6.dylib 0x00000001223663a9 SetCGColorComponents + 265
6 libtk8.6.dylib 0x0000000122366c5a TkpGetColor + 250
7 libtk8.6.dylib 0x00000001222a1059 Tk_GetColor + 153
8 libtk8.6.dylib 0x0000000122290f16 Tk_Get3DBorder + 134
9 libtk8.6.dylib 0x0000000122290d7f Tk_Alloc3DBorderFromObj + 127
10 libtk8.6.dylib 0x00000001222a255d DoObjConfig + 941
11 libtk8.6.dylib 0x00000001222a2095 Tk_InitOptions + 357
12 libtk8.6.dylib 0x00000001222a1f75 Tk_InitOptions + 69
13 libtk8.6.dylib 0x00000001222d310c CreateFrame + 1548
14 libtk8.6.dylib 0x00000001222d33e7 TkListCreateFrame + 151
15 libtk8.6.dylib 0x00000001222cada8 Initialize + 2168
16 _tkinter.cpython-36m-darwin.so 0x00000001220fbafc Tkapp_New + 892
17 _tkinter.cpython-36m-darwin.so 0x00000001220fb621 _tkinter_create + 289
18 python 0x000000010327a570 _PyCFunction_FastCallDict + 256
19 python 0x000000010334607a call_function + 154
20 python 0x000000010333e688 _PyEval_EvalFrameDefault + 22536
21 python 0x000000010333780b _PyEval_EvalCodeWithName + 539
22 python 0x0000000103346dfd _PyFunction_FastCallDict + 413
23 python 0x00000001031fe350 _PyObject_FastCallDict + 336
24 python 0x000000010322395a method_call + 122
25 python 0x000000010320482e PyObject_Call + 62
26 python 0x00000001032a1485 slot_tp_init + 117
27 python 0x00000001032a685b type_call + 235
28 python 0x00000001031fe2c2 _PyObject_FastCallDict + 194
29 python 0x00000001032054a7 _PyObject_FastCallKeywords + 327
30 python 0x0000000103346194 call_function + 436
31 python 0x000000010333e721 _PyEval_EvalFrameDefault + 22689
32 python 0x00000001033464e1 fast_function + 225
33 python 0x0000000103346132 call_function + 338
34 python 0x000000010333e688 _PyEval_EvalFrameDefault + 22536
35 python 0x000000010333780b _PyEval_EvalCodeWithName + 539
36 python 0x0000000103346dfd _PyFunction_FastCallDict + 413
37 python 0x00000001031fe350 _PyObject_FastCallDict + 336
38 python 0x000000010322395a method_call + 122
39 python 0x000000010320482e PyObject_Call + 62
40 python 0x000000010333e807 _PyEval_EvalFrameDefault + 22919
41 python 0x000000010333780b _PyEval_EvalCodeWithName + 539
42 python 0x0000000103243bbd function_call + 125
43 python 0x000000010320482e PyObject_Call + 62
44 python 0x000000010333e807 _PyEval_EvalFrameDefault + 22919
45 python 0x000000010333780b _PyEval_EvalCodeWithName + 539
46 python 0x000000010334657b fast_function + 379
47 python 0x0000000103346132 call_function + 338
48 python 0x000000010333e688 _PyEval_EvalFrameDefault + 22536
49 python 0x00000001033464e1 fast_function + 225
50 python 0x0000000103346132 call_function + 338
51 python 0x000000010333e688 _PyEval_EvalFrameDefault + 22536
52 python 0x000000010333780b _PyEval_EvalCodeWithName + 539
53 python 0x000000010334657b fast_function + 379
54 python 0x0000000103346132 call_function + 338
55 python 0x000000010333e688 _PyEval_EvalFrameDefault + 22536
56 python 0x000000010333780b _PyEval_EvalCodeWithName + 539
57 python 0x000000010334657b fast_function + 379
58 python 0x0000000103346132 call_function + 338
59 python 0x000000010333e721 _PyEval_EvalFrameDefault + 22689
60 python 0x000000010333780b _PyEval_EvalCodeWithName + 539
61 python 0x000000010339ac8b PyRun_FileExFlags + 235
62 python 0x000000010339a658 PyRun_SimpleFileExFlags + 504
63 python 0x00000001033bfd8a run_file + 170
64 python 0x00000001033beed4 Py_Main + 2772
65 python 0x00000001031f7374 main + 276
66 libdyld.dylib 0x00007fff93c315ad start + 1
)
2020-09-01 10:44:42.994 python[63078:24525645] *** Terminating app due to uncaught exception 'NSInvalidArgumentException', reason: '-[QNSApplication macMinorVersion]: unrecognized selector sent to instance 0x7f8c3462bb10'
*** First throw call stack:
(
0 CoreFoundation 0x00007fff89e87452 __exceptionPreprocess + 178
1 libobjc.A.dylib 0x00007fff94fbe73c objc_exception_throw + 48
2 CoreFoundation 0x00007fff89ef118d -[NSObject(NSObject) doesNotRecognizeSelector:] + 205
3 CoreFoundation 0x00007fff89df74c1 ___forwarding___ + 1009
4 CoreFoundation 0x00007fff89df7048 _CF_forwarding_prep_0 + 120
5 libtk8.6.dylib 0x00000001223663a9 SetCGColorComponents + 265
6 libtk8.6.dylib 0x0000000122366c5a TkpGetColor + 250
7 libtk8.6.dylib 0x00000001222a1059 Tk_GetColor + 153
8 libtk8.6.dylib 0x0000000122290f16 Tk_Get3DBorder + 134
9 libtk8.6.dylib 0x0000000122290d7f Tk_Alloc3DBorderFromObj + 127
10 libtk8.6.dylib 0x00000001222a255d DoObjConfig + 941
11 libtk8.6.dylib 0x00000001222a2095 Tk_InitOptions + 357
12 libtk8.6.dylib 0x00000001222a1f75 Tk_InitOptions + 69
13 libtk8.6.dylib 0x00000001222d310c CreateFrame + 1548
14 libtk8.6.dylib 0x00000001222d33e7 TkListCreateFrame + 151
15 libtk8.6.dylib 0x00000001222cada8 Initialize + 2168
16 _tkinter.cpython-36m-darwin.so 0x00000001220fbafc Tkapp_New + 892
17 _tkinter.cpython-36m-darwin.so 0x00000001220fb621 _tkinter_create + 289
18 python 0x000000010327a570 _PyCFunction_FastCallDict + 256
19 python 0x000000010334607a call_function + 154
20 python 0x000000010333e688 _PyEval_EvalFrameDefault + 22536
21 python 0x000000010333780b _PyEval_EvalCodeWithName + 539
22 python 0x0000000103346dfd _PyFunction_FastCallDict + 413
23 python 0x00000001031fe350 _PyObject_FastCallDict + 336
24 python 0x000000010322395a method_call + 122
25 python 0x000000010320482e PyObject_Call + 62
26 python 0x00000001032a1485 slot_tp_init + 117
27 python 0x00000001032a685b type_call + 235
28 python 0x00000001031fe2c2 _PyObject_FastCallDict + 194
29 python 0x00000001032054a7 _PyObject_FastCallKeywords + 327
30 python 0x0000000103346194 call_function + 436
31 python 0x000000010333e721 _PyEval_EvalFrameDefault + 22689
32 python 0x00000001033464e1 fast_function + 225
33 python 0x0000000103346132 call_function + 338
34 python 0x000000010333e688 _PyEval_EvalFrameDefault + 22536
35 python 0x000000010333780b _PyEval_EvalCodeWithName + 539
36 python 0x0000000103346dfd _PyFunction_FastCallDict + 413
37 python 0x00000001031fe350 _PyObject_FastCallDict + 336
38 python 0x000000010322395a method_call + 122
39 python 0x000000010320482e PyObject_Call + 62
40 python 0x000000010333e807 _PyEval_EvalFrameDefault + 22919
41 python 0x000000010333780b _PyEval_EvalCodeWithName + 539
42 python 0x0000000103243bbd function_call + 125
43 python 0x000000010320482e PyObject_Call + 62
44 python 0x000000010333e807 _PyEval_EvalFrameDefault + 22919
45 python 0x000000010333780b _PyEval_EvalCodeWithName + 539
46 python 0x000000010334657b fast_function + 379
47 python 0x0000000103346132 call_function + 338
48 python 0x000000010333e688 _PyEval_EvalFrameDefault + 22536
49 python 0x00000001033464e1 fast_function + 225
50 python 0x0000000103346132 call_function + 338
51 python 0x000000010333e688 _PyEval_EvalFrameDefault + 22536
52 python 0x000000010333780b _PyEval_EvalCodeWithName + 539
53 python 0x000000010334657b fast_function + 379
54 python 0x0000000103346132 call_function + 338
55 python 0x000000010333e688 _PyEval_EvalFrameDefault + 22536
56 python 0x000000010333780b _PyEval_EvalCodeWithName + 539
57 python 0x000000010334657b fast_function + 379
58 python 0x0000000103346132 call_function + 338
59 python 0x000000010333e721 _PyEval_EvalFrameDefault + 22689
60 python 0x000000010333780b _PyEval_EvalCodeWithName + 539
61 python 0x000000010339ac8b PyRun_FileExFlags + 235
62 python 0x000000010339a658 PyRun_SimpleFileExFlags + 504
63 python 0x00000001033bfd8a run_file + 170
64 python 0x00000001033beed4 Py_Main + 2772
65 python 0x00000001031f7374 main + 276
66 libdyld.dylib 0x00007fff93c315ad start + 1
)
libc++abi.dylib: terminating with uncaught exception of type NSException
Abort trap: 6
Hi, I'm having the same issue when deploying BERT onto an EC2 instance... the only read/writable directory is public/files and I think it's trying to write the cache into a somewhere it doesn't have permission to. Is there any way to change the default ?
Thanks!
cannot cache function 'sparse_correct_alternative_cosine': no locator available for file '/var/www/html/periscopebe/dev/venv/lib/python3.10/site-packages/pynndescent/sparse.py
