Unet-Segmentation
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lmb-freiburg
The U-Net Segmentation plugin for Fiji (ImageJ)
Hello, I am a PhD student attempting to train a 2D model to segment Purkinje cells using the u-net Fiji plugin. I am running this on a Mac mini OS...
Hi, I'm trying to use the U-Net plugin for Fiji on Linux, but I get the following error when I try to segment an image using a model generated with...
I am trying to run the u-net plugin on Fiji and have connected trough remote host from AWS. I have the package downloaded as instructed by https://lmb.informatik.uni-freiburg.de/resources/opensource/unet/ on the remote...
Hi, I wanted to create a macro script to run the Finetune model in headless mode, I tried the following script but it seems that this is not the right...
I have trained U-Net to detect instances of stem cells in bright-field images. Current performance is fairly good, with a final IoU of around ~.7. However, in scenarios where the...
Hello all, Does U-Net run with CUDA 10.1? I have used U-Net with CUDA 10.0, but currently I want to build U-Net on CUDA 10.1 for some reasons. My server's...
Hi everyone, I set up the u-net on aws ec2 and its running now. However, my result looked very off:  and on the result the output is not the...
I installed the backed server on an Ubuntu 18.04 Virtual machine ( Oracle VM) and i have tried following the instructions in the video for segmentation, finetuning and detection but...
Hello, my GPU is Tesla V100-32G, when I use 508x508 tile shape as you did in the tutorial video, the speed is somewhat well, but when I use 1500x1500 tile...
I am trying to use a backend server to run my segmentation, but I am unable to access it with my RSA key. In my standard terminal I am able...
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The U-Net Segmentation plugin for Fiji (ImageJ)