Luke Chang
Luke Chang
Hmm...I think we have changed some things to how the predict function works after this was implemented and I doubt anyone has used it since. I think we decided that...
I think this is fine with me.
oh, nice that's perfect! I'll just have to add some checks if it is a distance or similarity matrix.
Have you tried using Numba to see if that helps speed up the permutations? I'll take a look at the maximum t-stat function in the next few weeks while I...
I had started prototyping a TFCE implementation awhile back based on @markallenthornton's matlab version, but never finished. I would love to have both randomise and TFCE implemented if anyone has...
Not sure the best way to do this, we could just make a `bids_importer` function for the `file_reader` module. Here's a hacky 1st pass: ``` import nibabel as nib def...
Hi @orduek, most of our mask functions are not designed to work with probabilistic masks, only binary ones. It's easy to convert to binary using the `dat.threshold()` method. However, without...
@ejolly should we consider adding in a weighted mean for probablistic maps at some point?
That would be great @orduek if you're up for it! I think at this point, it probably makes the most sense to add this to the `extract_roi` method see [source...
We should talk about this and simplify and consolidate. Just took a peak at this and one thing I'm concerned about with `Brain_Data.threshold` is the `coerce_nan` flag is set to...