liweiqing1997

ValueError: The number of positions must match the number of atoms

2

Can someone help me. Why am I getting this error when I run inference： Traceback (most recent call last): File "/data/lwq/openfold-1.0.0/lib/conda/envs/openfold_venv/lib/python3.7/runpy.py", line 193, in _run_module_as_main "__main__", mod_spec) File "/data/lwq/openfold-1.0.0/lib/conda/envs/openfold_venv/lib/python3.7/runpy.py", line...

When I ran the openfold-multimer branch code to infer the multi-chain amino acid sequence, I encountered the following error. Can someone tell me the solution. (openfold_venv) [lwq@alphafold2-1 openfold-multimer]$ cd /data/lwq/openfold-multimer...

ERROR: Could find neither hhm_db nor a3m_db!

2

May I ask why this error occurs, I have confirmed that the relevant database and file paths are correct as required. However, using docker does not have this error when...

RuntimeError: Error compiling objects for extension

2

Please help me. How to solve this problem. I have no idea：：：： /data/lwq/openfold-main/lib/conda/envs/openfold_venv/lib/python3.7/site-packages/torch/include/torch/csrc/api/include/torch/nn/cloneable.h:57:59: 错误：从类型‘const torch::OrderedDict’到类型‘torch::OrderedDict&’中的 static_cast 无效 /data/lwq/openfold-main/lib/conda/envs/openfold_venv/lib/python3.7/site-packages/torch/include/torch/csrc/api/include/torch/nn/cloneable.h:69:61: 错误：从类型‘const torch::OrderedDict’到类型‘torch::OrderedDict&’中的 static_cast 无效 /data/lwq/openfold-main/lib/conda/envs/openfold_venv/lib/python3.7/site-packages/torch/include/torch/csrc/api/include/torch/nn/cloneable.h: In instantiation of ‘std::shared_ptr torch::nn::Cloneable::clone(const c10::optional&) const...

error in python3 setup.py install:"TypeError: expected string or bytes-like object"

2

can you help me ! I ran it according to the instructions, I don't know why I get an error (openfold_venv) [lwq@alphafold2-1 openfold-main]$ python3 setup.py install No CUDA runtime is...

opendalta delta model支持p-tuning v2 嘛？

[Misc]: Improving VLLM KVCACHE Transfer Efficiency with NCCL P2P Communication

1

### Anything you want to discuss about vllm. I hope to utilize the NCCL point-to-point communication protocol (P2P) to transfer the VLLM KVCACHE from the prefill node to the decode...

[Bug]: Qwen72B service(TP=4) gets stuck after running N requests. The GPU utilization of 3 GPUs is at 100%, while 1 GPU is at 0%. Simultaneously, the CPU utilization is at 100%, and many requests are in CLOSE_WAIT status.

5

### Your current environment Collecting environment information... PyTorch version: 2.1.2+cu121 Is debug build: False CUDA used to build PyTorch: 12.1 ROCM used to build PyTorch: N/A OS: Ubuntu 22.04.3 LTS...