liweiqing1997

> Do you have unrelaxed pdb? And does it have many atom clashes? In alphafold code, **I thought** that was caused by newly created or discarded disulfide bonds during relaxation...

> Do you have `gcc` and `nvcc` on your PATH? You need both in order to run `setup.py` and train the model. On many systems, you can just run `module...

> It may be a permissions issue. [deepmind/alphafold#202](https://github.com/deepmind/alphafold/issues/202) That's true, thanks