How to run TRUST4 with multiple paired-end read files

[dcarbajo]

Hi @mourisl I have cases where I have multiple -1 files and corresponding -2 files (not just one and one). I was wondering if there is a way to send multiples to TRUST4, something like:

run-trust4 -1 fileA1,fileB1 -2 fileA2,fileB2

or

run-trust4 -1 fileA1 -1 fileB1 -2 fileA2 -2 fileB2

I don't seem to identify that possibility in the code, but hopefully it exists. Otherwise I guess the solution would be to concatenate the files. Thanks!