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Published 20 hours ago • verified publisher icon liulab-dfci

Fixes input for parameter in 170

Open czarnewski opened this issue 2 years ago • 1 comments

Fixes the input file name for the "-f" parameter

czarnewski avatar Apr 05 '22 12:04 czarnewski

Thanks for the suggestion. I intentionally used the human_IMGT+C.fa file in the example to emphasize that for fastq input, we can also use the IMGT file as the input; while the bam input, it has to be the bcrtcr.fa with gene coordinate information.

mourisl avatar Apr 05 '22 17:04 mourisl

I was going to submit the same "fix". I suggest you explain this in the README, or you will probably receive more messages from users that find the same "bug".

ssnn-airr avatar Nov 18 '22 15:11 ssnn-airr

Thank you for the suggestions. I have updated the part about running the examples in the readme. Please let me know whether it clarifies.

mourisl avatar Nov 18 '22 19:11 mourisl