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Job Execution failed during RSEQC stage

Open ZHawul opened this issue 7 months ago • 1 comments

I have installed the package as detailed in the Tutorial of RNA-seq tumor immunity analysis using Google Cloud Platform on my institute’s HPC. The pipeline completes the star aligning, salmon and down sampling on the house keeping genes. But fails when running the tin_score, read_distrib_qc and junction_saturation jobs from RSEQC. I have included the .snakemake.log files which detail the errors. I have tried with different fastq files and the pipeline fails at the same stage. Any assistance would be greatly appreciated. 2023-12-04T152042.960586.snakemake.log RIMA_Error_Log.txt

ZHawul avatar Dec 04 '23 23:12 ZHawul