Guanliang MENG

Hi Phismil, I had a look your log file, the related information is this: ``` 2023-09-15 12:00:41,584 - mitoz.utility.utility - INFO - rRNA_annotation() return: s_rRNA_ft: /mnt/lustre/users/aemami-khoyi/eDNA/map/tmp_SW_sw_map.fasta_mitoscaf.fa/SW_sw_map.fasta_mitoscaf.fa.s-rRNA.ft l_rRNA_ft: /mnt/lustre/users/aemami-khoyi/eDNA/map/tmp_SW_sw_map.fasta_mitoscaf.fa/SW_sw_map.fasta_mitoscaf.fa.l-rRNA.ft 2023-09-15 12:00:41,584...

Hey, Thanks for pointing out the problem! I will add the information in the next release. The HMM files are used to screen out candidate mitochondrial sequences initially, and the...

Hi Phismil, In MitoZ paper, >We further annotate the putative control region in the case that the remaining interval region has a length ≥ 600 bp ([48] and all its...

Thanks, @Phismil! It would be great if you can provide a few publications about "some might have more than one control region." I'm interested in having a look at them.

Hi Phismil , Thanks for it!!

Hi @kabilov , Thanks for reporting the issue! I tested your command ``` mitoz annotate --fastafile NC_012920.fa --genetic_code 2 --clade Chordata --thread_number 4 --outprefix test ``` and the problem can...