multiGSEA
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Improve GeneSetDb subsetting
Currently you have to pass in a logical vector as long as nrow(geneSets(gdb))
to filter out gene sets from a GeneSetDb.
I am imagining an NSE (and tidyselect-compatible) way to do this. For example,
From this:
gdb.all <- exampleGeneSetDb()
gs <- geneSets(gdb.all)
gdb <- gdb.all[gs$collection %in% c("c2", "c7")]]
To:
gdb <- gdb.all[collection %in% c("c2", "c7")]