Liam

does `matUtils extract` has `-M` function?

3

Dear @yatisht, I have find the in the webpage `https://usher-wiki.readthedocs.io/en/latest/matUtils.html`, it has -M` function, but when I type `matUtils extract`, can not find this function: matUtils extract -i input.pb -a...

Dear @andysouth, Could you please tell me how to plot pie on the pop density map? Thanks.

Dear @andysouth, Could you please tell me do you have 2024 pop data?

Dear @xiaohk please see below:

Dear @alexeid, please see below: ``` Starting frequencies: [0.25, 0.25, 0.25, 0.25] MultiGammaSiteModel is java-only -- unless you use MGSMBeagleTreeLikelihood UCRelaxedClockModel: using 1362 rate categories to approximate rate distribution across...

Dear @stamatak, Could I know how to estimate the `#categories:` ?

Dear @amkozlov, If `+F = +FC (empirical)`, `+I ` should = `+IC`, right?

install error

2

Dear @amkozlov -- clang-tidy not found. -- Could NOT find GTest (missing: GTEST_LIBRARY GTEST_INCLUDE_DIR GTEST_MAIN_LIBRARY) -- GTest not found CMake Warning at test/src/CMakeLists.txt:5 (message): Skipping building tests. -- Configuring done...

error

3

Dear @amkozlov, Could you please help me figure it out, thanks. line 6: 35533 Bus error: 10

Dear @amkozlov, as you mentioned: ``` RAxML-NG implements marginal ancestral state reconstruction using the 'classical' empirical Bayesian method (same method is supported by PhyML and IQTree). ``` Is there any...