unimap icon indicating copy to clipboard operation
unimap copied to clipboard

mm_idx_str-like interface

Open 1dayac opened this issue 4 years ago • 1 comments

Hello Heng,

Unimap seems like a very useful tool! Is it possible to provide a mm_idx_str - like interface for index construction in unimap? (that takes "const char **seq" instead of path to the reference file)

Thank you!

1dayac avatar Jan 29 '21 21:01 1dayac

Unfortunately, the current internal structure of unimap can only build an index from an input file, not from strings. It is non-trivial to create a mm_idx_str like interface. I may consider to bring the feature back when unimap becomes more stable.

lh3 avatar Jan 29 '21 22:01 lh3