lfaller

As an update: this seems to be happening in Safari Version 10.0.1 (11602.2.14.0.7) as well.

I got the same error and was able to track it down using nanoplot (it provides a more detailed error message). ``` NanoPlot --fastq input.fastq.gz --loglength --outdir log_scaled Traceback (most...

Ok, I just ran into this error again but this time, my data seems to be formatted well enough for nanoplot to run. @rrwick can you think of other formatting...

Looking into the code, nanoplot uses biopython's modules to read fastq, whereas porechop implements its own fastq reader. I still don't know what was wonky about my fastq data but...

Ok sounds good, thanks!!

Great, thanks for this update!

Thanks for the feedback, Martin! I tried the dotplot visualization and while it gives a nice birds-eye view, I am hoping for a solution that let's me look a bit...

I ended up killing it but unfortunately I don't know what caused the problem :-( I had some samples that were quickly assembled, and other samples that weren't (even though...