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Latest version of GTDB

Open claudiodonati opened this issue 1 year ago • 5 comments

Hi,

I was wondering if there is any plan to provide a prebuilt database for the latest version of GTDB (release 220)

Thanks

Claudio

claudiodonati avatar Nov 15 '24 14:11 claudiodonati

@claudiodonati Unfortunately, I'm no longer available to maintain Struo2, but @atyakhtmpg may have the bandwidth

nick-youngblut avatar Nov 15 '24 16:11 nick-youngblut

That's a pity. Having an updated version of the major databases would save people a lot of work. I hope somebody can step in. Thanks anyway

claudiodonati avatar Nov 21 '24 07:11 claudiodonati

@claudiodonati Unfortunately, I'm no longer available to maintain Struo2, but @atyakhtmpg may have the bandwidth

Releases for the recent GTDB versions are in our backlog, will keep you updated.

atyakhtmpg avatar Nov 21 '24 08:11 atyakhtmpg

Great! That's exactly what I hoped to hear. Thanks a lot, it's a great resource and will save me a lot of work

claudiodonati avatar Nov 21 '24 10:11 claudiodonati

Is there any update on the latest version of GTDBtk? I tried to build it by following the steps, but I faced errors with the Snakemake file.

jojyjohn28 avatar Oct 20 '25 13:10 jojyjohn28