Coverage matrix for regions

Open Prakrithi-P opened this issue 2 years ago • 1 comments

Hi , Thank you so much for the package. I'm wondering how to load .bw files and calculate coverage matrix for specified custom regions. I couldn't find this in the documentation. It would be really helpful if I could know how to do this.

Thanks and regards, Prakrithi

Aug 17 '23 06:08 Prakrithi-P

Hi,

Thank you for your interest in derfinder. It sounds like you could use http://lcolladotor.github.io/derfinder/reference/getRegionCoverage.html with files specified and fullCov = NULL.

Best, Leo

Aug 17 '23 14:08 lcolladotor