scHPL

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Hello! I believe scHPL is a wonderful package to process data from multi-samples. But i met some question with your example data. I failed to find out the file "progressive_learning.py"...

XiuanZhang

Implement FAISS GPU support

9

When trying to use the package with FAISS-GPU installed, the GPU was not used automatically and also there was no option for enabling it manually. I added this functionality. However,...

nictru

treeArches on Tabula Sapiens

1

I am using treeArches to train a tree for a single-tissue (thymus) subset of the Tabula Sapiens dataset (https://tabula-sapiens-portal.ds.czbiohub.org/). I followed the training steps listed [here](https://github.com/lcmmichielsen/scHPL/issues/7#issuecomment-1650025226), but the scHPL.train.train_tree() function...

sarah-chapin

Hi, I have been trying to use treeArches for my analysis. I had a hard time getting the setup done but finally everything worked. I now have been having issues...

apal6

Bumps [jinja2](https://github.com/pallets/jinja) from 3.1.4 to 3.1.6. Release notes Sourced from jinja2's releases. 3.1.6 This is the Jinja 3.1.6 security release, which fixes security issues but does not otherwise change behavior...

dependabot[bot]