Luke Zappia

I think this should have sorted itself out by now so I'm close the issue but please comment if it comes up again for someone.

I think that is reasonable. Assuming we have a Zarr backend at some point we might want to choose the file type based on the extension but that's something that...

I'm not sure I understand your sketch of the implementation but I think the idea is good. I think it's worth seeing if there is an existing data structure we...

Ok. In that case maybe it should be called something like `AnnDataList` or `AnnDataSlotList`, or something to make it clear it is an internal object class?

I'm not sure how I feel about this. I can see that it's nice to do this automatically but I don't like the idea of making up rules for specific...

> I dislike that this is a special case where we guess the mapping, we do not do this for other cases (such as nearest neighbors graphs)? However, I do...

> Huh indeed, thanks! It's the `basis` argument in `scanpy.pl.scatter` that prepends the `X_`. You're right. That doesn't seem ideal so I've opened an issue https://github.com/scverse/scanpy/issues/3803. I think that's more...

I can also see both sides but I guess I lean the other way. My feeling is that once you start doing this you have to make a lot of...

@rcannood I would merge this unless you have a reason not to?

Hi @LongpanUPC Thanks for reporting this. As you have probably guessed, I think you are probably running into limit for an integer in R, you can check this with: ```r...