ggbio
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lawremi
Grid and ggplot2 based visualization for biological data
Hi, I am trying to plot mutations from multiple individuals on the same track of circular plot. I have GRanges object that looks like this: GRanges object with 26 ranges...
I'm trying to make a gene model plot using the ggbio tracks function. When I do autoplot alone, it looks fine, but when I use tracks, the x-axis ticks are...
Hello I have a Granges object that is like this : ``` GRanges with 6 ranges and 6 metadata columns: seqnames ranges strand | score id highlight | [1] 1...
> p.ideo Loading... > Error in normArgTrack(track, trackids) : Unknown track: cytoBand SOLVED - Used cytoband attribute
library(TxDb.Mmusculus.UCSC.mm10.knownGene) data(genesymbol, package = "biovizBase") txdb
Hi all, I've having problems running some code that was previously Ok for me. Can anyone see what is going wrong? Did ggbio change how it plots transcripts? Regards, Mark...
Hi, I'm trying to use stat_coverage function with a GRanges object with multiple seqnames. When I plot the data, the facets are not created and just the first sequence is...
Hi there, I think I found a problem with the way ggbio handles track labels when I add a main title to the plot. I think the code I've included...
Please export any classes meant to be user-facing (like GGbio, Tracks?) from the NAMESPACE. We need this for ReportingTools (@gmbecker). Thanks!
Hi Michael, I found a bug in the bbgio function getLimits: NA values present in the y values give NA for both min and max values. This leads to an...
