Michael Lawrence
Michael Lawrence
You did miss it: ``` mcols(grl, level="within") ``` I guess the real issue is that it's so hard to find...
@hpages OK, I thought it was your thing. I guess it was Patrick's. I found it by accident a couple years ago.
In most cases, it's often preferable to do something like getting the transcript ranges and then doing a `psetdiff(tx, introns_or_exons)`.
I've recently encountered a use case for the "equal" type. I've defined it along the lines of `setequal()`, so duplicates and order are ignored when determining whether two compound ranges...
I guess what I meant is that `type="within"` requires a within-match for all query ranges (so the query is a subset of the subject in a more general sense), while...
That's right. It was easier to program and more efficient to ignore the duplicates and order and was good enough for my use case. That was the only rationale.