AlphaFold3
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[BUG] Problems with local install
Describe the bug Problems with local install.
To Reproduce Steps to reproduce the behavior:
❯ pip install alphafold3
Collecting alphafold3
Using cached alphafold3-0.0.4-py3-none-any.whl.metadata (4.9 kB)
Collecting einops (from alphafold3)
Using cached einops-0.8.0-py3-none-any.whl.metadata (12 kB)
Collecting openfold (from alphafold3)
Using cached openfold-0.0.1.tar.gz (164 kB)
Installing build dependencies ... done
Getting requirements to build wheel ... error
error: subprocess-exited-with-error
× Getting requirements to build wheel did not run successfully.
│ exit code: 1
╰─> [17 lines of output]
Traceback (most recent call last):
File "/media/fkt/82c1c9f8-5b60-449e-b3b1-2710aabe45ee/learn_AF3/venv/lib/python3.10/site-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 353, in <module>
main()
File "/media/fkt/82c1c9f8-5b60-449e-b3b1-2710aabe45ee/learn_AF3/venv/lib/python3.10/site-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 335, in main
json_out['return_val'] = hook(**hook_input['kwargs'])
File "/media/fkt/82c1c9f8-5b60-449e-b3b1-2710aabe45ee/learn_AF3/venv/lib/python3.10/site-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 118, in get_requires_for_build_wheel
return hook(config_settings)
File "/tmp/pip-build-env-8x0rxkos/overlay/lib/python3.10/site-packages/setuptools/build_meta.py", line 325, in get_requires_for_build_wheel
return self._get_build_requires(config_settings, requirements=['wheel'])
File "/tmp/pip-build-env-8x0rxkos/overlay/lib/python3.10/site-packages/setuptools/build_meta.py", line 295, in _get_build_requires
self.run_setup()
File "/tmp/pip-build-env-8x0rxkos/overlay/lib/python3.10/site-packages/setuptools/build_meta.py", line 487, in run_setup
super().run_setup(setup_script=setup_script)
File "/tmp/pip-build-env-8x0rxkos/overlay/lib/python3.10/site-packages/setuptools/build_meta.py", line 311, in run_setup
exec(code, locals())
File "<string>", line 19, in <module>
ModuleNotFoundError: No module named 'torch'
[end of output]
note: This error originates from a subprocess, and is likely not a problem with pip.
error: subprocess-exited-with-error
× Getting requirements to build wheel did not run successfully.
│ exit code: 1
╰─> See above for output.
note: This error originates from a subprocess, and is likely not a problem with pip.
Since I saw the ModuleNotFoundError: No module named 'torch'
massage, I checked it but torch
is already installed.
❯ pip list
Package Version
------------------------ ----------
filelock 3.14.0
fsspec 2024.3.1
Jinja2 3.1.4
MarkupSafe 2.1.5
mpmath 1.3.0
networkx 3.3
nvidia-cublas-cu12 12.1.3.1
nvidia-cuda-cupti-cu12 12.1.105
nvidia-cuda-nvrtc-cu12 12.1.105
nvidia-cuda-runtime-cu12 12.1.105
nvidia-cudnn-cu12 8.9.2.26
nvidia-cufft-cu12 11.0.2.54
nvidia-curand-cu12 10.3.2.106
nvidia-cusolver-cu12 11.4.5.107
nvidia-cusparse-cu12 12.1.0.106
nvidia-nccl-cu12 2.20.5
nvidia-nvjitlink-cu12 12.4.127
nvidia-nvtx-cu12 12.1.105
pip 24.0
setuptools 65.5.0
sympy 1.12
torch 2.3.0
triton 2.3.0
typing_extensions 4.11.0
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