obnb

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I was expecting the processed mondo ontology to only have 1 connected component but this is not the case. I am not sure if this is because I am misunderstanding...

kmanpearl

create term hold-out scenario.

1

Currently when making an `OBNBDataset` object the `splitter` allows the user to specify the _gene_ hold out method using different [partitions](https://github.com/krishnanlab/obnb/blob/main/src/obnb/label/split/partition.py) to create training/validation/testing splits. We would like to be...

kmanpearl

When initializing an [HPO object](https://github.com/krishnanlab/obnb/blob/main/src/obnb/data/annotated_ontology/hpo.py), the label set collection is empty. I suspect this is because HPO uses the mondo terms beginning with `HP:` and something changed in the mondo...

kmanpearl